Gene Information

Name : Kvar_3150 (Kvar_3150)
Accession : YP_003440067.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Virulence
Product : TetR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1309
EC number : -
Position : 3283668 - 3284255 bp
Length : 588 bp
Strand : -
Note : PFAM: Tetracyclin repressor domain protein; regulatory protein TetR; KEGG: kpe:KPK_3281 tetracycline repressor protein class A from transposon 1721

DNA sequence :
ATGGCTAAAATTCAGCGGGATCAGGTCATTAATGCTGCATTAGCACTCTTAGATGAAGTCGGGCTGGAAGCGATAACGAC
GCGAAAGCTGGCGCAAAAGCTGGGGGTAGAATCCGCAACGCTGTACTGGCATTTCAGGAACAAGGCCAGCTTACTGGAAG
AGATGGCCGCAACTGTTTTGGCCAGGCACCATTCGCTTCCGCTGGCTGAAAACACGGCCGAGTGGGCAGACTGGCTGGCA
AATAACGCGCGCAGTTTCCGCCGCGCGCTTCTCGCTCATCGGGATGGCGCACTGCTCCATGCGGGGACAACACCGGCGCG
GGTAGGAGGGGAAACGTTCTACCCAAAGGTGGCTTACCTTATGCGGGCCGGCTTTTCTGAGGCCGAAGCCGCAATGATAT
TACTCACTATTAGCGAATATACCCTGGGATGCGTATTGGAGGAGCAGTCTCGTACAGACAGACATGATGATGAAAGATTG
TCTACACCCTCAACAGAAATCAGTCGTATCGATGCGCTTACCCACCAACATCCGGATACCTGTTTTGAGTTCGGTCTGTC
TTTGATCATGAAGGGGTTATTAAAATAA

Protein sequence :
MAKIQRDQVINAALALLDEVGLEAITTRKLAQKLGVESATLYWHFRNKASLLEEMAATVLARHHSLPLAENTAEWADWLA
NNARSFRRALLAHRDGALLHAGTTPARVGGETFYPKVAYLMRAGFSEAEAAMILLTISEYTLGCVLEEQSRTDRHDDERL
STPSTEISRIDALTHQHPDTCFEFGLSLIMKGLLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetR(A) AGK07084.1 TetR(A) Not tested SGI1 Protein 2e-36 48
tetR(A) ACK44536.1 TetR(A) Not tested SGI1 Protein 2e-36 48
tetR(A) AGK07026.1 TetR(A) Not tested SGI1 Protein 2e-36 48
tetR YP_006098395.1 tetracycline repressor Not tested Tn2411 Protein 2e-36 48
tetR(A) ACN81010.1 repressor protein Not tested AbaR5 Protein 2e-36 48
tetR CAJ77065.1 Tetracycline repressor protein Not tested AbaR1 Protein 2e-36 48
BJAB07104_00278 YP_008207743.1 Transcriptional regulator Not tested AbaR25 Protein 3e-35 47
BJAB0868_00282 YP_008211608.1 Transcriptional regulator Not tested AbaR26 Protein 3e-35 47
tetR AEA34668.1 tetracycline repressor protein Not tested Not named Protein 2e-35 47
tetR AFH57203.1 repression protein Not tested AbaR4a Protein 2e-35 47
ABZJ_00261 YP_005524217.1 tetracycline repressor protein TetR Not tested AbaR22 Protein 2e-35 47
tetR AFV47970.1 repressor protein TetR Not tested AbaR25 Protein 2e-35 47
tetR YP_005797161.1 tetracycline repressor protein class G Not tested AbaR4e Protein 2e-35 47
tetR AFV47998.1 repressor protein TetR Not tested delta-AbaR25 Protein 2e-35 47
tetR(B) AEQ20906.1 tetracycline repressor protein Not tested Tn6166 Protein 2e-35 47
tetR(B) AEZ06046.1 repressor protein Not tested Tn6167 Protein 2e-35 47
tetR AAL08444.1 tet repressor Not tested SRL Protein 2e-35 46
tetR2 YP_005176247.1 tetracycline repressor protein Not tested ICEPmu1 Protein 3e-35 44
tetR1 YP_005176239.1 tetracycline repressor protein Not tested ICEPmu1 Protein 3e-35 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_3150 YP_003440067.1 TetR family transcriptional regulator VFG1035 Protein 9e-36 46