Gene Information

Name : Kvar_3012 (Kvar_3012)
Accession : YP_003439930.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1221
EC number : -
Position : 3138936 - 3139925 bp
Length : 990 bp
Strand : +
Note : KEGG: kpe:KPK_3117 phage shock protein operon transcriptional activator; TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA

DNA sequence :
ATGGCGAAATTCATCATGGCGCAGTACAAGGATAATCTGCTGGGCGAGGCCAACAGCTTTCTCGAGGTGCTGGAACAGGT
TTCCCGGCTGGCTCCGCTGGATAAGCCGGTGCTGGTCATCGGCGAGCGCGGCACCGGGAAAGAGCTTATCGCTAACCGTC
TCCACTACCTCTCCAGCCGCTGGCAGGGACCGTTTATCTCGCTGAACTGCGCGGCGCTGAACGACAATTTGCTCGATTCG
GAACTATTCGGCCACGAAGCCGGGGCCTTCACCGGGGCCAGCAAGCGCCATCCCGGGCGCTTCGAGCGCGCCGACGGCGG
GACGTTATTTCTTGATGAGCTGGCGACGGCGCCGATGCTGGTGCAGGAGAAGCTGTTAAGAGTGATTGAATATGGCGAGC
TGGAGCGCGTGGGCGGCAGCCAGCCGCTGCAGGTCAACGTCCGGCTGGTGTGCGCCACCAACGCTGACCTGCCGCGGATG
GTGGAAGAAGGCCATTTTCGCGCCGACCTGCTCGACCGTCTGGCCTTCGACGTGGTGCAGCTCCCCCCGTTGCGTGAACG
GCAGAGCGACATCATGCTGCTCGCCAACCAGTTTGCCATTCAGATGTGCCGCGAGCTCGGTTTGCCGCTGTTTCCCGGCT
TCAGCGAACGTGCCACCGCAACGCTGCTCGGCTACCGCTGGCCAGGGAATATTCGTGAACTGAAGAATGTCGTCGAGCGC
TCGGTCTATCACCACGGCGACAGCGAGCACGAGCTGGACGCCATTATCCTTAACCCTTTCCGTCAGACCGCGGCCTCCGT
GCCGGAGGCCGCGTCCGGGGACGAGCTGCCCGCTCTGCCGCTGGATTTGCGCGATTTTCAGCTCCAGCAGGAAAAACGCC
TGCTGCTGCGGAGTCTGCAGCAGGCGAAGTATCATCAGAAGCAGGCGGCGGAGCTGCTGGGGTTAACCTATCACCAGCTC
CGCGCGCTACTAAAAAAACATCAGCTGTGA

Protein sequence :
MAKFIMAQYKDNLLGEANSFLEVLEQVSRLAPLDKPVLVIGERGTGKELIANRLHYLSSRWQGPFISLNCAALNDNLLDS
ELFGHEAGAFTGASKRHPGRFERADGGTLFLDELATAPMLVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPRM
VEEGHFRADLLDRLAFDVVQLPPLRERQSDIMLLANQFAIQMCRELGLPLFPGFSERATATLLGYRWPGNIRELKNVVER
SVYHHGDSEHELDAIILNPFRQTAASVPEAASGDELPALPLDLRDFQLQQEKRLLLRSLQQAKYHQKQAAELLGLTYHQL
RALLKKHQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpS AAT96161.1 HrpS Virulence T-PAI Protein 5e-31 42
hrpS AAT96215.1 HrpS Virulence T-PAI Protein 5e-31 42
hrpS NP_791207.1 type III transcriptional regulator HrpS Virulence Hrp PAI Protein 2e-31 41
hrpS AAC34753.1 HrpS Virulence Hrp PAI Protein 8e-32 41