Gene Information

Name : Kvar_3003 (Kvar_3003)
Accession : YP_003439921.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Virulence
Product : redoxin
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 3131171 - 3131677 bp
Length : 507 bp
Strand : +
Note : PFAM: redoxin; KEGG: kpe:KPK_3107 thiol peroxidase

DNA sequence : 
ATGTCACAAACCGTGCATTTCCAGGGCAACCCCGTTTCTGTTCAGGGCACCATTCCGCAGGCAGGCGCTAAAGCGCAGCC
GTTTACGCTGGTCGCCAAAGATCTCTCTGACGTCGCGCTGAGCCAGTACGCCGGCAAACGTAAAGTACTGAATATTTTCC
CGAGCATTGATACCGGCGTGTGTGCCGCATCAGTGCGTAAATTCAACCAGCTGGCCGCTGAACTGGACAACACTGTGGTG
CTGTGCATTTCCGCTGACCTGCCGTTCGCCCAGTCCCGCTTCTGCGGCGCGGAAGGCCTGAGCAACGTGGTGACCCTTTC
CACGCTGCGCGGTGCGTCGTTCCTCGCTGACTACGGTGTCGCCATCGCCGCCGGTCCGCTGGCTGGCCTGGCCGCTCGCG
CCGTGGTCGTTATCGATGAAAATGATCAGGTCGTCTACAGCCAGCTGGTGAATGAAATCACCGAAGAGCCGGACTACGAC
GCCGCGCTGGCCGCCCTGAAAGCCTGA

Protein sequence : 
MSQTVHFQGNPVSVQGTIPQAGAKAQPFTLVAKDLSDVALSQYAGKRKVLNIFPSIDTGVCAASVRKFNQLAAELDNTVV
LCISADLPFAQSRFCGAEGLSNVVTLSTLRGASFLADYGVAIAAGPLAGLAARAVVVIDENDQVVYSQLVNEITEEPDYD
AALAALKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-26 49
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 7e-27 49
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-26 49
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 5e-27 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_3003 YP_003439921.1 redoxin VFG0087 Protein 2e-27 49