Gene Information

Name : Kvar_2974 (Kvar_2974)
Accession : YP_003439892.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Virulence
Product : EvpB family type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 3099839 - 3101383 bp
Length : 1545 bp
Strand : -
Note : TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: kpe:KPK_3068 type VI secretion protein, EvpB/VC_A0108 family

DNA sequence :
ATGTCTGTTACCACAGAAAACGCCCCTGTTCAGGGGCAAACCACGTTGCAGGAAAATAGGGCGGGCGAGGGCGTTTACGC
CTCGCTGTTTGAAAAAATTAATCTCGCCCCGGCCTCTCACCTCGGGGATATCAACGACTTTCTGGACGATGCCGCGCTCT
CCGAGGCGCCGGCGGCGGAACGTCTCACCGCGGCGATGCAGGTGTTTATGGAGCGCATCCGTCAGTCCGGTCAGCGGGTG
GAAAAGCTCGACAAAACGCTGATTGATCACCATATCGCCGAACTGGATTTCCAGATAAGCCGTCAGCTGGACGCGGTGAT
GCACCATCAGGAGTTTCAGCAGGTCGAATCCCTGTGGCGCGGCCTCAAACAGCTGGTGGACAACACCGACTATCGGCAGA
ACGTCAAAACGGAGATCCTGGACGTCGCCAAAGACGATCTGCGCCAGGACTTTGAGGACGCGCCGGAGCTTATCCAGAGC
GGCCTCTACTGGCACACCTATACCGCGGAGTATGACACTCCCGGCGGCGAGCCGATCGGCTCGGTGATCTCGGCCTATGA
GTTCGACGCCAGCCCGCAGGATGTGGCGCTCCTGCGCAATATCTCCCGCGTCTCTGCGGCCGCCCATATGCCGTTTATCG
GCGCCGTCGGCCCGGCCTTCTTCCTGAAAGAGACCATGGAAGAGGTGGCTGCTATTAAGGATATCGGCAACTACTTCGAT
CGCGCGGAATATATCCGCTGGAAATCATTTCGTGAAACCGACGATGCCCGCTACATCGGTCTGGTGATGCCGCGCGTGCT
GGGTCGTCTGCCGTACGGTCCGGACACCGTGCCGGTGCGCAGCTTCAACTATGTCGAGCAGGTGAAAGGTCCGGAGCACG
AAAAGTATCTGTGGACCAGCGCAGCGTTCTCCTTCGCTTCCAATATGGTGAAGAGCTTTGTCAATAACGGCTGGTGCGTG
CAGATCCGCGGTCCGCAGGCCGGCGGCGCGGTGAAAGATCTGCCCATCCACCTGTACGATCTGGGCACCGGCAACCAGGT
GAAGATCCCTTCCGAGGTGATGATCCCGGAAACGCGGGAGTTTGAGTTCGCCAGCCTGGGCTTTATCCCGCTGTCGTACT
ACAAAAATCGCGATTACGCCTGCTTCTTCTCGGCCAACTCCGCGCAGAAACCGGCGCTGTACGATACCGCCGACGCCACC
GCCAACAGCCGCATCAACGCGCGTCTGCCTTATATCTTCCTGCTGTCGCGCATCGCGCACTACCTGAAGATGATCCAGCG
CGAGAATATCGGCACCACCAAGGACCGGCGGCTGCTGGAGCTGGAGCTGAACACCTGGGTGCGGAGCCTGGTGACTGAAA
TGACCGACCCCGGCGACGAGCTGCAGGCCTCCCATCCGCTGCGCGATGCCAGTGTGGTGGTGGAAGATATTGAGGATAAC
CCGGGCTTCTTCCGCGTGAAGCTGTACGCGGTGCCGCACTTCCAGGTCGAGGGGATGGACGTCAATCTGTCGCTGGTTAG
CCAGATGCCGAAGGCGAAGGCGTAG

Protein sequence :
MSVTTENAPVQGQTTLQENRAGEGVYASLFEKINLAPASHLGDINDFLDDAALSEAPAAERLTAAMQVFMERIRQSGQRV
EKLDKTLIDHHIAELDFQISRQLDAVMHHQEFQQVESLWRGLKQLVDNTDYRQNVKTEILDVAKDDLRQDFEDAPELIQS
GLYWHTYTAEYDTPGGEPIGSVISAYEFDASPQDVALLRNISRVSAAAHMPFIGAVGPAFFLKETMEEVAAIKDIGNYFD
RAEYIRWKSFRETDDARYIGLVMPRVLGRLPYGPDTVPVRSFNYVEQVKGPEHEKYLWTSAAFSFASNMVKSFVNNGWCV
QIRGPQAGGAVKDLPIHLYDLGTGNQVKIPSEVMIPETREFEFASLGFIPLSYYKNRDYACFFSANSAQKPALYDTADAT
ANSRINARLPYIFLLSRIAHYLKMIQRENIGTTKDRRLLELELNTWVRSLVTEMTDPGDELQASHPLRDASVVVEDIEDN
PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-100 44
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 3e-100 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_2974 YP_003439892.1 EvpB family type VI secretion protein VFG2475 Protein 5e-110 45
Kvar_2974 YP_003439892.1 EvpB family type VI secretion protein VFG2093 Protein 3e-107 44
Kvar_2974 YP_003439892.1 EvpB family type VI secretion protein VFG2070 Protein 3e-86 43