Gene Information

Name : Kvar_2716 (Kvar_2716)
Accession : YP_003439635.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG4977
EC number : -
Position : 2821521 - 2821895 bp
Length : 375 bp
Strand : +
Note : PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: kpu:KP1_2658 multiple antibiotic resistance protein

DNA sequence : 
ATGTCCAGACGTAATAATGACGCCATCACTATCCATAGTATTTTGTCGTGGATCGAGGATAACCTGGAATCGCCCCTGTC
GCTGGAAAAAGTGTCTGAGCGTTCAGGTTACTCCAAGTGGCACCTGCAACGTATGTTTAAGAAAGAGACCGGCCATTCCC
TCGGCCAGTACATCCGCAGCCGCAAGCTGACGGAGATTGCGCAAAAGCTCAAGCAGAGCAATGAGCCCATTTTGTACCTG
GCGGAACGCTACGGTTTCGAGTCGCAGCAGACCCTGACGCGAACGTTCAAGAACTATTTCGATGTTCCGCCCCACAAGTA
TCGCATAACGAATGTACCTGGCGAATCCCGCTATCTGCATCCGCTAAATAACTGA

Protein sequence : 
MSRRNNDAITIHSILSWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKLTEIAQKLKQSNEPILYL
AERYGFESQQTLTRTFKNYFDVPPHKYRITNVPGESRYLHPLNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 3e-21 47
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 3e-21 47
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 2e-19 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 9e-55 100
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 1e-52 95
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator CP001138.1.gene1637. Protein 1e-51 93
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator NC_002695.1.917339.p Protein 1e-52 93
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator BAC0560 Protein 1e-52 93
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator CP000034.1.gene1596. Protein 2e-52 92
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 1e-21 47
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator CP001138.1.gene612.p Protein 2e-22 46
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator BAC0371 Protein 7e-20 43
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 1e-19 43
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 7e-20 43
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 7e-20 43
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 5e-20 43
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 1e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator VFG1038 Protein 1e-21 47
Kvar_2716 YP_003439635.1 AraC family transcriptional regulator VFG0585 Protein 6e-20 43