Gene Information

Name : Kvar_1124 (Kvar_1124)
Accession : YP_003438064.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 1179121 - 1179603 bp
Length : 483 bp
Strand : -
Note : TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: kpu:KP1_4198 SsrA tmRNA-binding protein

DNA sequence :
ATGACTAAGAAAAAAGCCCACAAACCTGGATCAGCCACCATTGCGCTGAATAAACGCGCCCGTCACGAATACTTTATCGA
AGATGAATACGAGGCTGGTCTCGCCCTGCAGGGCTGGGAAGTCAAATCCCTGCGTGCAGGCAAAGCCAACATCGGCGATA
GCTATGTCATCCTGAAGGATGGCGAAGCCTTCCTGTTCGGCGCCAACTTTACGCCCATGGCCGTGGCTTCCACCCACTAT
GTGTGCGACCCGACGCGCACCCGTAAGCTACTGCTTAACCAGCGTGAGCTGGACACGCTGTACGGCCGCATTAACCGCGA
AGGTTACACTGTCGTCGCCCTGTCGCTGTACTGGAAGAACGCCTGGTGCAAAGTGAAAATCGGCGTCGCCAAAGGTAAGA
AACAGCACGACAAGCGTACCGACCTGAAAGATCGTGAATGGGCGCTGGATAAGGCGCGTATTATGAAGCACGCCGGACGC
TAA

Protein sequence :
MTKKKAHKPGSATIALNKRARHEYFIEDEYEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAFLFGANFTPMAVASTHY
VCDPTRTRKLLLNQRELDTLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRTDLKDREWALDKARIMKHAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 1e-50 69
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-25 48
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 3e-19 43