Gene Information

Name : Kvar_1120 (Kvar_1120)
Accession : YP_003438060.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 1175366 - 1175722 bp
Length : 357 bp
Strand : +
Note : PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: kpe:KPK_1164 transcriptional regulator, AraC family

DNA sequence : 
ATGATGAACACTGGCGCCATCATTCAGGATCTGATCGACTGGATCGACAACCATCTTGATAGCCGTCTGGATATTGACAC
CGTTGCCCGACGATCCGGCTATTCGAAGTGGCACCTGCAGCGGATCTTCAAAGAACATACCGGGCAGCCCCTCGGAGAAT
ATATTCGGGCGCAAAAGCTGCAAAAGTCGGTCGAACGCTTAGCCCACAGCAACGAGCCGATCCTGAACGTGGCGATCGCC
CTCGGCTTTGACTCCCAGCAGTCCTTCAACCGCAGCTTCAAGCGCCAGTATGGCCAGGCGCCCGGCGTCTGGCGCCGGAG
TATCAGCCGCTCTGCAGGGCAAGCATCTCGTCAGTGA

Protein sequence : 
MMNTGAIIQDLIDWIDNHLDSRLDIDTVARRSGYSKWHLQRIFKEHTGQPLGEYIRAQKLQKSVERLAHSNEPILNVAIA
LGFDSQQSFNRSFKRQYGQAPGVWRRSISRSAGQASRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 3e-24 47
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 1e-19 43
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 1e-19 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 1e-25 49
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 6e-25 48
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator BAC0371 Protein 6e-25 48
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 9e-25 47
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 1e-24 47
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 5e-25 46
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator CP001138.1.gene1637. Protein 1e-23 46
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 4e-24 45
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 6e-24 45
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator NC_002695.1.917339.p Protein 1e-23 45
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator BAC0560 Protein 1e-23 45
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator CP000034.1.gene1596. Protein 8e-24 45
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 5e-20 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator VFG0585 Protein 8e-25 47
Kvar_1120 YP_003438060.1 AraC family transcriptional regulator VFG1038 Protein 4e-20 43