Gene Information

Name : Kvar_0101 (Kvar_0101)
Accession : YP_003437045.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 103532 - 105613 bp
Length : 2082 bp
Strand : -
Note : KEGG: kpe:KPK_0096 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; SMART: DEAD-like helicase ; helicase

DNA sequence :
ATGTCAGGCCGCCTGCTCGATGCCGTTCCGCTCAGCTCACTCACCGGTGTGGGCGCTGCGCAAAGCAGTAAACTGGCGAA
GATCGGCCTGCATACGGTTCAGGACCTGCTGCTGCACCTGCCGCTGCGTTACGAAGATCGCACCCATCTTTACCCGATAG
CCGAGCTGCTTCCCGGGGTTTATGCCACCGTGGAAGGCGAAGTGCTCAACAGCAATATCACCTTCGGCGGCCGGCGGATG
TTGACCTGCCAGATCAGCGACGGCACCGGCATCCTCACCATGCGCTTTTTCAACTTTAACGCGGCGATGAAAAACAGCCT
CGCGACTGGTCGTCGGGTGCTGGCCTACGGTGAAGCCAAACGCGGGAAGTACGGCGCCGAGATGATCCACCCGGAATACC
GCGTCCAGGGCGATATGAGCACCCCGGAGCTTCAGGAAACGTTAACTCCGGTCTATCCGACCACCGAAGGCATCAAGCAG
GCGACCCTGCGCAAGCTCACCGACCAGGCGCTTGAGCTCCTGGAAACCTGCGCGATTAGCGAACTCCTCCCACCGGAGCT
GGCGCAGGGGATGATGAGCCTGCCGGAAGCGCTGCGTACGCTGCACCGTCCGCCTCCCTCCTTGCAACTTAGCGAGCTGG
AAAGCGGCAAGCACCCGGCGCAGCAGCGTCTGATTCTGGAAGAGCTGCTGGCGCATAACCTCAGCATGCTGGCGCTGAGG
GCAGGCGCCCAGCGCTATCACGCCCTGCCGCTCGGCGCCAACGATACCCTGAAAAACCAGCTGCTGGCCTCCCTGCCCTT
TAAGCCCACCGGCGCGCAGGCGCGGGTTACCGCCGAGATCGAACACGATATGGCGCTGGACGTGCCGATGATGCGCCTGG
TGCAGGGCGATGTTGGCTCCGGTAAAACGCTGGTCGCCGCGCTGGCCGCCGTGCGCGCTATCGCCCATGGCAAACAGGTG
GCGCTGATGGCGCCCACCGAACTACTTGCCGAACAGCACGCCAATAACTTCCGCAGCTGGTTTGAACCGCTGGGCATAGA
AGTCGGCTGGCTGGCGGGCAAACAGAAAGGCAAAGCCCGTCAGGCGCAGCAGGAGGCTATCGCCAGCGGCGAAGTGCAGA
TGATTGTCGGCACTCACGCCATCTTCCAGGAGCAGGTGCAGTTTAACGGCCTGGCGCTGGTGATTATCGACGAACAGCAC
CGCTTCGGCGTGCATCAGCGGCTGGCGCTGTGGGAAAAAGGTCAGCAGCAGGGGTTCCACCCGCATCAGCTGATCATGAC
CGCCACGCCTATCCCCCGCACCCTGGCAATGACCGCCTACGCCGATCTGGACACCTCGATTATCGACGAGCTGCCGCCGG
GCCGAACCCCGGTGACCACCGTCGCCATCCCGGACACCCGGCGCAGCGATATTATCGACCGCGTACGCAACGCCTGCACC
CACGAAGGGCGCCAGGCCTATTGGGTTTGTACGCTAATTGAAGAGTCCGATCTGCTGGAAGCCCAGGCGGCGGAAGCGAC
CTGGGAAGAGCTCAAACTGGCGCTGCCGGAACTGAATATCGGCCTCGTCCACGGGCGGATGAAACCGGCCGAGAAGCAGG
CGGTAATGCAGGCCTTCAAGCAAGGCGAGATGCATCTGCTGGTGGCCACCACGGTGATTGAAGTCGGTGTTGACGTGCCT
AACTCAAGCCTGATGATTATCGAAAACCCGGAACGTCTGGGTCTGGCGCAGCTGCACCAGCTCAGAGGGCGCGTCGGGCG
CGGCGCGGTCGCTTCCCACTGCGTGCTACTCTATAAATCGCCGCTCTCCAAAACGGCTCAGAAACGCCTGCAGGTCCTGC
GCGACAGCAACGACGGTTTCGTCATCGCCCAGAAAGACCTCGAAATCCGCGGTCCCGGCGAGCTGCTCGGCACCCGCCAG
ACCGGCAACGCCGAATTTAAAGTAGCGGACTTGCTGCGCGATCAGGCGATGATCCCCGACGTTCAACGCATTGCTCGCCA
TATTCATGAACGCTATCCGCTGCAGGCCCAGGCGCTTATCGAGCGCTGGATGCCGGAAACCGAACGCTATTCCAACGCGT
AG

Protein sequence :
MSGRLLDAVPLSSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIAELLPGVYATVEGEVLNSNITFGGRRM
LTCQISDGTGILTMRFFNFNAAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRVQGDMSTPELQETLTPVYPTTEGIKQ
ATLRKLTDQALELLETCAISELLPPELAQGMMSLPEALRTLHRPPPSLQLSELESGKHPAQQRLILEELLAHNLSMLALR
AGAQRYHALPLGANDTLKNQLLASLPFKPTGAQARVTAEIEHDMALDVPMMRLVQGDVGSGKTLVAALAAVRAIAHGKQV
ALMAPTELLAEQHANNFRSWFEPLGIEVGWLAGKQKGKARQAQQEAIASGEVQMIVGTHAIFQEQVQFNGLALVIIDEQH
RFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIPDTRRSDIIDRVRNACT
HEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGEMHLLVATTVIEVGVDVP
NSSLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQ
TGNAEFKVADLLRDQAMIPDVQRIARHIHERYPLQAQALIERWMPETERYSNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 1e-97 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_0101 YP_003437045.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 59