Gene Information

Name : Kvar_0987 (Kvar_0987)
Accession : YP_003437927.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1037280 - 1038101 bp
Length : 822 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: kpn:KPN_03079 iron transporter: fur regulated

DNA sequence : 
ATGAATGCAGCGCAAGCGGGACTGTATGTCGACCAGCTCACCGTCACCTGGCGCAACGGCCACACTGCCCTGCGCGACGC
CTCGTTCAGCGTACCGCGCGGCTCCATTGCCGCACTGGTGGGCGTTAACGGCTCGGGTAAATCCACACTGTTTAAAGCGC
TGATGGGCTTTGTGCGCGTCGGCCACGGCGAGATCGCCATACTCGGCCAGCCGGTCAACCGCGCGCTGCGCCAGAACCTG
GTCGCCTATGTCCCGCAGTCGGAAGAGGTGGACTGGTCCTTCCCGGTGCTGGTGGAGGATGTGGTGATGATGGGCCGCTA
CGGCCATATGGGCTGGCTGCGGCGGGCAAAGCCGCGCGATCGCGAGATTGTCGATGCCGCGCTGGCCCGCGTGGGCATGA
GCGAGTTCCGCCATCGGCAGATTGGCGAGCTCTCCGGCGGGCAGAAAAAGCGCGTTTTCCTTGCCCGCGCTATCGCTCAG
CAGGGTCAGGTGATCCTGCTGGATGAGCCTTTTACCGGCGTCGATGTGCAGACCGAAGCGCGGATCATCAGCCTGCTGCG
CGAGCTCCGCGATGAGGGCTGTACCATGCTGGTCTCCACCCACAACCTCGGGTCAGTGAGCGAATTTTGTGATTACACGG
TGATGGTGAAAGGCACCGTGCTGGCCAGCGGCCCGACAGAAACCACCTTCACCGCCGAGAATCTGGAGCGGGCTTTCAGC
GGCGTGCTGCGCCACGTCGCGCTCACCGGCGGGGAAGCGCAGGTTATCACCGATGACGAGCGGCCGTTTATCAGCCGGCG
CGCGGCAGGAGGCCCACGATGA

Protein sequence : 
MNAAQAGLYVDQLTVTWRNGHTALRDASFSVPRGSIAALVGVNGSGKSTLFKALMGFVRVGHGEIAILGQPVNRALRQNL
VAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKPRDREIVDAALARVGMSEFRHRQIGELSGGQKKRVFLARAIAQ
QGQVILLDEPFTGVDVQTEARIISLLRELRDEGCTMLVSTHNLGSVSEFCDYTVMVKGTVLASGPTETTFTAENLERAFS
GVLRHVALTGGEAQVITDDERPFISRRAAGGPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-106 82
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-106 82
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 8e-108 82
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-108 82
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 6e-108 82
unnamed CAD33755.1 putative ABC transporter ATP-binding protein Virulence PAI I 536 Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_0987 YP_003437927.1 ABC transporter BAC0350 Protein 4e-108 82
Kvar_0987 YP_003437927.1 ABC transporter BAC0440 Protein 1e-78 62
Kvar_0987 YP_003437927.1 ABC transporter BAC0400 Protein 4e-48 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_0987 YP_003437927.1 ABC transporter VFG0526 Protein 3e-108 82
Kvar_0987 YP_003437927.1 ABC transporter VFG1496 Protein 7e-25 41