Gene Information

Name : Kvar_0986 (Kvar_0986)
Accession : YP_003437926.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1036435 - 1037283 bp
Length : 849 bp
Strand : -
Note : PFAM: ABC transporter; KEGG: kpe:KPK_1042 iron ABC transporter permease AfeC

DNA sequence : 
ATGAGCTGGCTGCTGGAGCCGTTTGGCTATCACTATATGATCAATGCGATGTGGGTGTCGGCGCTGGTAGGCGGCGTCTG
TGCGTTTCTCTCCTGCTACCTGATGCTGAAGGGCTGGTCGCTGATTGGCGACGCCCTCTCCCACTCGATTGTGCCCGGCG
TCGCCGGGGCCTATATGCTCGGCCTGCCTTTCGCGCTCGGCGCGTTTCTCTCCGGCGGCCTGGCGGCGGGCAGCATGCTG
TTTTTGCAGCAGCGCTCGCGGCTGAAAGAGGATGCCATTATTGGCCTGATCTTCTCCTCCTTCTTCGGGATCGGGCTGTT
TATGGTGTCGCTGAATCCGACGTCGGTGAATATCCAGACCATTATCCTCGGCAATATTCTGGCCATCGCCCCGGAGGATA
TTATCCAGCTGGCGGCGATCGGCTTTATCTCGATGGCGATCCTGCTGCTGAAGTGGAAAGATCTGATGGTGACCTTCTTT
GATGAAAACCATGCCCGCTCGATTGGCCTGAACACCCGCGGCCTGAAGCTGCTGTTCTTTACCCTGCTGGCCGCCTGCAC
CGTGGCGGCGCTGCAGACCGTCGGCGCCTTTCTGGTCATCTGCCTGGTGGTGACTCCCGGGGCCACCGCGTGGCTGTTAA
CCGACCGCTTTCCGCGCCTGCTGGCCATCGCCGTGGCTATCGGCAGTCTGACCAGTTTCTTCGGCGCCTGGCTCAGCTAC
TATCTCGACGGCGCCACCGGCGGCATTATCGTGGTCGCGCAAACGCTGTTGTTCCTCATCACCTTTATCTTCGCGCCGAA
GCACGGCCTGCTGGCCAGCCGCCGCCGTGCCAGGGAGGCCGCATGCTGA

Protein sequence : 
MSWLLEPFGYHYMINAMWVSALVGGVCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFALGAFLSGGLAAGSML
FLQQRSRLKEDAIIGLIFSSFFGIGLFMVSLNPTSVNIQTIILGNILAIAPEDIIQLAAIGFISMAILLLKWKDLMVTFF
DENHARSIGLNTRGLKLLFFTLLAACTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLAIAVAIGSLTSFFGAWLSY
YLDGATGGIIVVAQTLLFLITFIFAPKHGLLASRRRAREAAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-83 88
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-83 88
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-83 88
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-83 88
sitC NP_461784.1 permease Virulence SPI-1 Protein 3e-83 88
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-35 43
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-35 43
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-35 43
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-35 43
sitD NP_461785.1 permease Virulence SPI-1 Protein 4e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_0986 YP_003437926.1 ABC transporter BAC0351 Protein 2e-83 88
Kvar_0986 YP_003437926.1 ABC transporter BAC0441 Protein 1e-66 70
Kvar_0986 YP_003437926.1 ABC transporter BAC0352 Protein 2e-35 43
Kvar_0986 YP_003437926.1 ABC transporter BAC0442 Protein 2e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kvar_0986 YP_003437926.1 ABC transporter VFG0527 Protein 1e-83 88
Kvar_0986 YP_003437926.1 ABC transporter VFG0528 Protein 2e-35 43