Gene Information

Name : Ferp_1372 (Ferp_1372)
Accession : YP_003435798.1
Strain : Ferroglobus placidus DSM 10642
Genome accession: NC_013849
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1177609 - 1179585 bp
Length : 1977 bp
Strand : +
Note : TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: afu:AF0

DNA sequence :
ATGGAAGAACACATGCATCATGTCGAGGAGAGAAAAGCTAAGCACGAGCATAAAAAGCTGCATCACGAACACATGATGGA
AGACTTCAAGAGGAGATTTCTCGCCTCAACAGCCCTTACAATCCCAATTATAATCCTTTCACCCTTCATTCAAAAAGTTT
TCAACTACACTCTCGAATTTCTGGGGAGAGCGTACGTTCTTTTCCTACTTTCCTCCATCGTTTACTTCTACGGCGGATAC
CCCTTCTTCAAGGGATTTTTCGACGAGTTTAAAAAGAGAACCCCCGGAATGATGACGCTAATAGCTGTTGCCATCACCTC
AGCCTACGTTTACAGCTCAGCCGTAGTTTTCGGATTAAAAGGAAAGTACTTCTTCTGGGAGCTGGCGACGTTAATTGATG
TTATGCTTCTCGGACATTACATAGAGATGAAATCAGTTCTCGGAGCTTCGAGAGCTTTAGAAGAACTCGTTAAAATTATG
CCGTCAACAGCCCATTTAATTAAAAACGGTGAAATAAAGGAAGTTCCGGTTGAAGAGCTGAAACCCGGAGACATCGTTCT
TGTCAAACCCGGAGAAAAGATTCCGGCTGATGGAATTGTGATAGAAGGAGAGAGTTACGTGGATGAATCTATGCTAACTG
GAGAGAGCAAGCCTGTTTTGAAAAAGCGAGGAAAGAAGGTGATAGGAGGAGCGATAAACCTTGAAGGTTCTTTGAAGGTG
AAAGTAGAAAAAACTGGAAAAGACACGTACCTCAGCCAGATAATAGAGCTCGTTAAAGCTGCTCAGGAGAGTAAGTCGAA
AACTCAGGATTTGGCAAACAGAGCTGCTTTTCTACTCACGATCATCGCTCTAACAGCTGGATTCATAACCTTCACAACCT
GGATGTTCTTTGGAAAGGATTTGGCTTTCGCTGTTGAAAGAGCAGTTACGGTGATGGTCATCTCCTGCCCTCACGCGTTG
GGGTTAGCAATTCCTCTCGTCGTGGCAGTTTCAACCTCTTTAGCTGCTAAGAACGGCTTACTCATAAGGAACAGGCAGGC
TTTCGAGAGAGTCAAGGAGGTTGAAGCCGTAGTTTTCGATAAAACCGGAACTCTAACTGAGGGTAAGTTCGGCGTCGCTG
ATGTTTTCACTTTCAGCAAAAACGAAGATGTTCTGAGAATTGCCGCAAGCATAGAGGTGAATTCCGAACATCCGATTGCA
AGAAGCATAGTTGAAGAGGCAAAAAAGAGAGGAATTGAGCTTTTGAAAGTTGAAGAGTTCAAAGCAATTCCCGGAAAGGG
TGTTGAAGCTAAGGTTAACGGGGAGTTCTACAGAATTGTAAGCCCCGGATACTTAAAAGAGGCTGGTATTGACGTCGATA
TCCCAGAAGAGGCTATAAAGGGGAAAACCGTCGTTTACCTCGTCAAGGATAGTAAGGTGATCGGAGCGATCGCTTTAGCA
GACAAAGTTAAGCCGGAGTCTAAAGAGGCTATACAGAAGCTGAAGGACATGGGGATAAAGTGCATGATGCTTACCGGAGA
TAGCAGAGTTGTGGCTGAAAAAGTTGCCGAAGAGCTTGGACTGGATGAGTTCTTCGCCGAAGTTTTGCCCCACGAAAAAG
CGGAGATAATAAAGAGACTTCAGGAGAAATTCGTCGTTGCGATGGTTGGAGACGGAATTAACGACGCTCCAGCTTTAGCT
CAGGCTGATGTCGGAATCGCTATCGGAGCCGGAACGGATGTTGCGATAGAGACAGCAGACATTATTCTCGTTAGAAGCGA
TCCAAGAGATGTGGTGAGGATTATAGAGCTTTCGAAGAAAACCTACAGAAAGATGTTGCAGAACTTGCTTTGGGCTACTG
GCTACAACAGCGTTGCTATACCTTTGGCGGCGGGAGTTGCTTACAGCATCGGCGTACTACTTACTCCAGCCGTAGGAGCG
GCTTTAATGTCTTTAAGCACGGTGATAGTAGCTGCAAACGCCAAACTTCTGAAATAA

Protein sequence :
MEEHMHHVEERKAKHEHKKLHHEHMMEDFKRRFLASTALTIPIIILSPFIQKVFNYTLEFLGRAYVLFLLSSIVYFYGGY
PFFKGFFDEFKKRTPGMMTLIAVAITSAYVYSSAVVFGLKGKYFFWELATLIDVMLLGHYIEMKSVLGASRALEELVKIM
PSTAHLIKNGEIKEVPVEELKPGDIVLVKPGEKIPADGIVIEGESYVDESMLTGESKPVLKKRGKKVIGGAINLEGSLKV
KVEKTGKDTYLSQIIELVKAAQESKSKTQDLANRAAFLLTIIALTAGFITFTTWMFFGKDLAFAVERAVTVMVISCPHAL
GLAIPLVVAVSTSLAAKNGLLIRNRQAFERVKEVEAVVFDKTGTLTEGKFGVADVFTFSKNEDVLRIAASIEVNSEHPIA
RSIVEEAKKRGIELLKVEEFKAIPGKGVEAKVNGEFYRIVSPGYLKEAGIDVDIPEEAIKGKTVVYLVKDSKVIGAIALA
DKVKPESKEAIQKLKDMGIKCMMLTGDSRVVAEKVAEELGLDEFFAEVLPHEKAEIIKRLQEKFVVAMVGDGINDAPALA
QADVGIAIGAGTDVAIETADIILVRSDPRDVVRIIELSKKTYRKMLQNLLWATGYNSVAIPLAAGVAYSIGVLLTPAVGA
ALMSLSTVIVAANAKLLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 5e-102 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ferp_1372 YP_003435798.1 copper-translocating P-type ATPase BAC0629 Protein 0.0 75
Ferp_1372 YP_003435798.1 copper-translocating P-type ATPase BAC0383 Protein 6e-110 46
Ferp_1372 YP_003435798.1 copper-translocating P-type ATPase BAC0079 Protein 1e-124 46
Ferp_1372 YP_003435798.1 copper-translocating P-type ATPase BAC0622 Protein 1e-90 44
Ferp_1372 YP_003435798.1 copper-translocating P-type ATPase BAC0101 Protein 3e-94 42
Ferp_1372 YP_003435798.1 copper-translocating P-type ATPase BAC0183 Protein 5e-91 41
Ferp_1372 YP_003435798.1 copper-translocating P-type ATPase BAC0012 Protein 2e-89 41
Ferp_1372 YP_003435798.1 copper-translocating P-type ATPase BAC0346 Protein 6e-90 41