Gene Information

Name : HTH_0938 (HTH_0938)
Accession : YP_003432598.1
Strain : Hydrogenobacter thermophilus TK-6
Genome accession: NC_013799
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 863656 - 864327 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTCTTATAGAGCTAAGAGAAGTTAAGAAAACATACAGGCTGGACCATGTAGAGGTGCATGTGCTTAAGGGTATAAG
CATGAGTGTAGAAAGGGGGGAAGTGCTGGCTATCATGGGACCATCTGGCTCTGGAAAGTCCACCCTCATGAACATCATAG
GCTGTCTTGATGTGCCTACGGAGGGAGAATACATACTGGACGGTGTATCTATCAAAAACATGAGCACGGACCAGATAGCG
CGTGTTAGGAATACAAAGGTGGGCTTTGTTTTCCAGAGTTTTAATCTCATACCACGCCTTACCGCTCTTGAAAATGTGGA
GCTTCCCATGATATACGCGGGTGTTGGGAGAAGGGAGAGGAAAAAAAGGGCTGTGGAGCTTTTAAAGATGGTTGGGCTTG
GGGACAGAATTTACCACTATCCCAGCCAGCTTTCGGGAGGACAGCAACAGAGGGTTGCCATAGCCAGAGCCATAGCCAAC
AATCCCCCCATAATCCTTGCGGACGAACCGACAGGAAGCCTGGACACTGCAACGGGCAACATGATAATGGATCTGCTCCT
GTCCCTCAACGAAAGGTTAGGGACAACACTGATAGTTGTCACGCACGAACCTGCGGTAGCATCTTACTGCAAAAGGGTTG
TAAGGATAAAGGACGGCCTTCTGGTGGAATGA

Protein sequence : 
MALIELREVKKTYRLDHVEVHVLKGISMSVERGEVLAIMGPSGSGKSTLMNIIGCLDVPTEGEYILDGVSIKNMSTDQIA
RVRNTKVGFVFQSFNLIPRLTALENVELPMIYAGVGRRERKKRAVELLKMVGLGDRIYHYPSQLSGGQQQRVAIARAIAN
NPPIILADEPTGSLDTATGNMIMDLLLSLNERLGTTLIVVTHEPAVASYCKRVVRIKDGLLVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-27 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HTH_0938 YP_003432598.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-53 58
HTH_0938 YP_003432598.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-43 51
HTH_0938 YP_003432598.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-35 44
HTH_0938 YP_003432598.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-32 42