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Name : gspE (HTH_0428) Accession : YP_003432093.1 Strain : Hydrogenobacter thermophilus TK-6 Genome accession: NC_013799 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 428911 - 430350 bp Length : 1440 bp Strand : - Note : - DNA sequence : ATGGATGCAGAGGTAGGTAGGCACATAAATCACGAGTTTCTCAGCGCCAATGGTATAGCACCTCTGGAGGAAGGAGAGAA CTTTGTAAAGTTTGCATGCCTTAAAGAGGATGCATACCTTAAAGAGCTTTTAGAGAGAGCTCTGGGCAAGAAGGTGATCT TTGAGTTGGTGGACCAAGAAAAACTCAAAAATCTCCTTGAGGACCCTATTAGCATAGGTTTAGAGCTGGAAGCTCTGTCT GAGGATGCTCTGGATGAGAAGAAACTTGAGAACATAGCAGAAGAAGCGCCAATAGTGAAGTTTGTCAACGACACCATAAA GGATGCCATAATGAGGTCTGCAACGGACATACACATAGAACAGTTTGAGAACCATGTAGTGGTCAGGTACAGAATAGATG GTATTCTCTACACGGTTAGGGAGTATCCCAAGTACATAGCACCCCCTGTTATATCAAGGATAAAGATACTCTCAAGACTC AACATAGCGGAAAAGAGACTGCCTCAGGACGGGAAGCTCTCTTACTCCCTAAACGGTCAGGATTATGACATAAGGGTGTC CACAGTTCCTTCTGTTCACGGTGAGGGTGTGGTACTTAGAATACTAAAGAGGGGAGAGATTAACCTGAGTCTTCACACTC TGGGATTTAGAGAGCAGGATGTGGATGCTCTTCTATCTTTCATAAGGAAGCCCTACGGTATGATACTGGTTACGGGACCT ACCGGCTCTGGTAAAACTACCACCTTATATGCCTGCATGAAGGAGATAAACACGGGCCAGAAAAAGATAATAACTGTTGA AGACCCTGTAGAGTACAATTTAAGGGGTGTTGTGCAGATTCAGGTGATGCCCAAGATAGGACTTACCTTTGCCAATGCTC TAAGAAACATACTCAGACAGGACCCGGATGTGATCATGATAGGAGAGATAAGGGACCTGGAGACTGCCAGCATAGCGGTT CAGGCATCACTCACAGGACACTTGGTGCTTGCAACCCTTCATACCAACGATGCTGCAAGTGCTTTTACAAGACTCATAGA TATGGGCGTTGAGGAATTCCTCTTAGCCTCCGCAGTGGTAGGCGTAATATCCCAAAGGCTTGTAAGGAAAGTATGTCCTA ACTGCATTTACGAATACAAACCCACAACTTTTGAGGAAGAGGTGCTAAAGATGAATGGTATAGAAAGACCACAAAAGCTA TACAGGGGGAAAGGGTGCGAGCGATGCAACAACACAGGCTACTCTGGAAGGACGGTGATAGGTGAGGTGTTAAAAGTCAC GGAAGATATAAGGAGTCTTGTGGTGAAAAAGTCCGATGCTGGAAAGATAAAAGAACAGGCTATAAAGGATGGTATGGTGC CTCTTCTCAAAGACGGACTTTTGAAGGCTGTGGAAGGCATAACAACCGTAGAGGAGATACTCAGAGTTTACAGAGACTGA Protein sequence : MDAEVGRHINHEFLSANGIAPLEEGENFVKFACLKEDAYLKELLERALGKKVIFELVDQEKLKNLLEDPISIGLELEALS EDALDEKKLENIAEEAPIVKFVNDTIKDAIMRSATDIHIEQFENHVVVRYRIDGILYTVREYPKYIAPPVISRIKILSRL NIAEKRLPQDGKLSYSLNGQDYDIRVSTVPSVHGEGVVLRILKRGEINLSLHTLGFREQDVDALLSFIRKPYGMILVTGP TGSGKTTTLYACMKEINTGQKKIITVEDPVEYNLRGVVQIQVMPKIGLTFANALRNILRQDPDVIMIGEIRDLETASIAV QASLTGHLVLATLHTNDAASAFTRLIDMGVEEFLLASAVVGVISQRLVRKVCPNCIYEYKPTTFEEEVLKMNGIERPQKL YRGKGCERCNNTGYSGRTVIGEVLKVTEDIRSLVVKKSDAGKIKEQAIKDGMVPLLKDGLLKAVEGITTVEEILRVYRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-88 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-88 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_003432093.1 | type II secretion system protein E | VFG0182 | Protein | 1e-92 | 51 |
| gspE | YP_003432093.1 | type II secretion system protein E | VFG1876 | Protein | 4e-90 | 51 |
| gspE | YP_003432093.1 | type II secretion system protein E | VFG2048 | Protein | 2e-89 | 48 |
| gspE | YP_003432093.1 | type II secretion system protein E | VFG2426 | Protein | 7e-77 | 44 |
