Gene Information

Name : HTH_1811 (HTH_1811)
Accession : YP_003433456.1
Strain : Hydrogenobacter thermophilus TK-6
Genome accession: NC_013799
Putative virulence/resistance : Resistance
Product : cation transporting ATPase, E1-E2 family
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1644564 - 1646624 bp
Length : 2061 bp
Strand : +
Note : -

DNA sequence :
ATGCTCTACACCTGCCCTATGCACCCGGAGGTGAAGAGAGAATCACCGGGTAAATGTCCCAAGTGTGGCATGGACCTTGT
CCCAACTGAACATCCTCCAAGAAAACACCACCACACCATGCACATGGAGGAAATGAAAAGGAAGGCTATAGTTTCAACAG
TCCTCACGATTCCCGTCGTTCTTTACTCCAAAAATATACAGAATCTCCTTCGCTTTTCCATGCCAGAGTTTCCTGGGAGC
GAGTGGATAACACCTATTTTATCCGCAATTGTTTTCTTTTACGGAGGGACCTTTTTCCTCAAGGGCATGGCAGAGGAATT
AAGGCTCAAAAAGCCCGGAATGATGACCCTTATAGGCATAGCCATATGGGTTGCCTTTATATACAGCCTCTCAACTCTAT
TACTTGGTGGAATGGAGTTCTTCTGGGAGCTTGCCACACTCATAGTGGTGATGCTCTGGGGACACTGGATAGAGATGAGG
TCTGTACTGGGAGCTTCGCGTGCCGTTGAGGAGCTGGCAAAGCTCATGCCTACCAAAGCAAACCTTCTAAAGGACGGGGA
GATAGTTGAGGTTCATGTCTCTGAGCTAAAGCCCGGTGATATAGTCTTGGTAAAACCTGGGGAGAAGATACCAGCGGACG
GGATTGTCATAGAAGGATTAACCCACATGAACGAGGCTATGCTCACAGGCGAATCTAAGCCAGTTCCCAAAGGCGTAGGT
GACAGAGTCATAGGCGGTGCCATAAACATGGAAGGCTCCATAAAGGTGAAGGTTGAGAAGACTGGTGAGGAGACCTATCT
AAGCCAAGTTCTGAAGCTCGTCAAAGAAGCTCAGGAGTCAAAAACAAAACTCCAGGACATGGCGGACAGAGTGGCGTTTT
ACCTCACCGTGATTGCCATAGTGGTCGGAAGCCTTGCCTTTCTTGTCTGGCTGTACCTCAAGGGGGACCTTCAGTTTGCT
GTTGAGAGAGCTGTGACGGTGATGGTAATAGCCTGTCCCCATGCTCTCGGGCTTGCCATACCTCTGGTTGTAGCCATATC
CACCTCCTACTCAGCTAAGAACGGGATATTAGTTAGAAACAGGCTTGCTCTTGAAACTATGAAGTATGTTGATACGGTGG
TCTTTGACAAGACGGGGACTCTGACGGAGGGTAAGTTTGGGGTTTCAGAGGTGGTGGCGGTCGGAATTTCTGAGAAGGAG
CTTTTAAGGCTTACTGCAGGGGTTGAAGAACGCTCAGAGCATGTTATAGCTCGGGCTATAGTTGAGGAAGCTAGGGAAAA
AGGGGTGAGCTTTCCAGAGGTCAAAAACTTTAGGGCTGTACCAGGCAAAGGTGTAGTGGCTGAAGCTGAAGGGAAAGAGG
TTGCGGTAGGAACGAGCCTGCTTATGGAGGAGCTTAAGGCGGAGAAAGAAACAAAGATACTAAACAGAGTTAAAGAATTT
GAATCCTATGGTAAAACGGTGGTTCTTGTTGCTATAAATAGGAAGCTAACCGGTGCGATAGCCCTCTCTGACAAAATAAG
GAGGGAGTCTTATGAGGCTGTATCGGAGCTAAAGAGATTGGGTAAAAGAGTGGTTATGATAACGGGTGATTCCGAAGAAG
TAGCCAGCTATGTGGCACGAGAACTGGGTATAGACGAATTCTTTGCAAGAGTTCTTCCCCATCAGAAGGCTCAGAAGGTG
AAAGAACTCCAGTCAAAGGGTAGAAAGGTGGCTATGGTGGGAGACGGAATAAACGATGCACCTGCCCTAGCTCAGGCGGA
TGTGGGTATTGCTATAGGGAGTGGGACTGATGTGGCTATAGAAAGCGCAGGGATAATCCTTGTAAAGGACGATCCAAGGG
ATGTGGTAAGAGTAGTAAGGCTTTCTTCAATAACTGTTAGAAAGATGTTTCAAAACCTCTTTTGGGCAACAAGCTACAAC
CTTTTTGCCATACCTTTGGCTGCTGGTATAGGCTACAGATGGGGCATACTGCTTCCGCCGGCAGTGGGTGCCCTTCTCAT
GAGCTTGAGTACCCTGATAGTATCCGTAAATGCCCTTCTCATGAGGAGGTCCCTAGAATGA

Protein sequence :
MLYTCPMHPEVKRESPGKCPKCGMDLVPTEHPPRKHHHTMHMEEMKRKAIVSTVLTIPVVLYSKNIQNLLRFSMPEFPGS
EWITPILSAIVFFYGGTFFLKGMAEELRLKKPGMMTLIGIAIWVAFIYSLSTLLLGGMEFFWELATLIVVMLWGHWIEMR
SVLGASRAVEELAKLMPTKANLLKDGEIVEVHVSELKPGDIVLVKPGEKIPADGIVIEGLTHMNEAMLTGESKPVPKGVG
DRVIGGAINMEGSIKVKVEKTGEETYLSQVLKLVKEAQESKTKLQDMADRVAFYLTVIAIVVGSLAFLVWLYLKGDLQFA
VERAVTVMVIACPHALGLAIPLVVAISTSYSAKNGILVRNRLALETMKYVDTVVFDKTGTLTEGKFGVSEVVAVGISEKE
LLRLTAGVEERSEHVIARAIVEEAREKGVSFPEVKNFRAVPGKGVVAEAEGKEVAVGTSLLMEELKAEKETKILNRVKEF
ESYGKTVVLVAINRKLTGAIALSDKIRRESYEAVSELKRLGKRVVMITGDSEEVASYVARELGIDEFFARVLPHQKAQKV
KELQSKGRKVAMVGDGINDAPALAQADVGIAIGSGTDVAIESAGIILVKDDPRDVVRVVRLSSITVRKMFQNLFWATSYN
LFAIPLAAGIGYRWGILLPPAVGALLMSLSTLIVSVNALLMRRSLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-90 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HTH_1811 YP_003433456.1 cation transporting ATPase, E1-E2 family BAC0629 Protein 2e-156 61
HTH_1811 YP_003433456.1 cation transporting ATPase, E1-E2 family BAC0079 Protein 2e-115 45
HTH_1811 YP_003433456.1 cation transporting ATPase, E1-E2 family BAC0101 Protein 9e-87 42
HTH_1811 YP_003433456.1 cation transporting ATPase, E1-E2 family BAC0383 Protein 4e-94 41
HTH_1811 YP_003433456.1 cation transporting ATPase, E1-E2 family BAC0183 Protein 1e-85 41