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Name : lysU (HTH_0174) Accession : YP_003431842.1 Strain : Hydrogenobacter thermophilus TK-6 Genome accession: NC_013799 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 179296 - 180999 bp Length : 1704 bp Strand : - Note : - DNA sequence : ATGGATCAGGAGAGACTCAAAAAACTTGAAAAATTGAAAGAACTTGACAATCCGTATCCTCACAAGTTTGAGGTAGATAG ATTCATAGAGGATATAAGGCAGATGTTTGAAAAAGACCCATCGGGAGAGGAGGTGTGTATAAAGGGTAAAGTCAAGAGGG TATCCAAGATAGATGAAGGCTTTCTGGTGAGAGTTGCTGACCAAGAAGGTGTTGAAATGCTCGTTATCACAGCGCACAAT TTGAATCAGGGAGAGGAGTACATCCTTAAGGGTAAGCTGGTAAGATACGAAGGGAAGCTAACTTTAAAGGATGCTGAACC TTCTGATAATCAGGCGATAGACATAAAGAGTTTAAAAGAAGCTTACGATTTTGACCCCAACTTTTATCAAGTCAGACTTG CTGGGAGACTTGTATCTCTCAGAAGTATGGGCAAAGCCATCTTTGGACACCTTCAGGATGCGACGGGAAAAGTGCAGATA TACATAAAAAAGGATGTAGTTGGAGATGAGAAGTTTAAGGTGTTTGATGACCTTTTTGACCTGGGAGATGTGATAGGAGT TGTGGGAAGGCTTTTCAGGACCAGCACTGGAGAATTAACTGTTGAGGTTCAAGACTTTAAAATGCTTGCCAAAAGTCTCC ATCCCTTACCAGAAAAGTGGCACGGACTAAAGGATGTGGAAGTTCGCTACAGACAGAGGTATCTGGACCTTATATCCAAC GAAAAGGCAAGAAGAATAACCCTGCTCAGAAGTAAACTCCTTTCGGAGATAAGAAAGTTCCTTGAAGAGAGAGGATTTAT AGAGGCGGAAACGCCAGTCCTTCAACACATTGCCTCTGGTGCCAACGCCAAACCTTTTATCACATATCACAACTACCTGG AACAGAACCTATACCTAAGGATAGCACCCGAACTTTACCTAAAGAGGCTTATTGTTGGAGGCTTCAACAGAGTTTACGAG CTTGGCAAGAACTTCAGAAACGAAGGCGTGGACACCACTCACAATCCAGAATTTACCATGCTGGAGTTTTACTGCGCTTA CTGGGACTATAAGGACCTCATGGAATTCACCCAAGAGCTTTTCTCTCACCTTCTTAAAAAACTCGTGGGAAGCCTTAAGA TAACCTATCAGAACTACACCCTTGACTTTACCCCCCCTTACAAAGTATACAGATACTTTGACCTTCTTTTGGAAAAAACC GGCAAAGACAAGGATTTCTTTTTAAGGCACGAAAAAGAAGTCAGAAAACTTGCCGCCGAGCTGGGCATTCCCAAAGCACA GGAGCTTACTCACGCTAAGCTTCTTGACAAGATATTTGATGTGCTGGTGGAGGACGAGCTTATAGGTCCCGCTTTTGTGA TTGACTTTCCCAAACTGCTCTCACCGCTTGCCAAAACCCACAGAGAAGATGAAGACCTGGTAGAAAGGTTTGAGCTTTTT GTAGCCGGAAAAGAGATAGCCAACGCTTACACGGAACTTAACGATCCCATAGAACAGAGAGATAGGTTTTTACAGCAGAT AAAGGAGAAGGAGATGGGGGATGAGGAGGCTATGCAGATGGACGAGGACTTTATTACCGCCTTGGAGTATGGCATGCCCC CCACTGCTGGAGAGGGCATAGGTATAGACAGATTAGTGATGCTCCTTGCGGATGTGGACTCTATAAGGGAGGTTATCCTC TTTCCTGCTTTACGGCAGCGATGA Protein sequence : MDQERLKKLEKLKELDNPYPHKFEVDRFIEDIRQMFEKDPSGEEVCIKGKVKRVSKIDEGFLVRVADQEGVEMLVITAHN LNQGEEYILKGKLVRYEGKLTLKDAEPSDNQAIDIKSLKEAYDFDPNFYQVRLAGRLVSLRSMGKAIFGHLQDATGKVQI YIKKDVVGDEKFKVFDDLFDLGDVIGVVGRLFRTSTGELTVEVQDFKMLAKSLHPLPEKWHGLKDVEVRYRQRYLDLISN EKARRITLLRSKLLSEIRKFLEERGFIEAETPVLQHIASGANAKPFITYHNYLEQNLYLRIAPELYLKRLIVGGFNRVYE LGKNFRNEGVDTTHNPEFTMLEFYCAYWDYKDLMEFTQELFSHLLKKLVGSLKITYQNYTLDFTPPYKVYRYFDLLLEKT GKDKDFFLRHEKEVRKLAAELGIPKAQELTHAKLLDKIFDVLVEDELIGPAFVIDFPKLLSPLAKTHREDEDLVERFELF VAGKEIANAYTELNDPIEQRDRFLQQIKEKEMGDEEAMQMDEDFITALEYGMPPTAGEGIGIDRLVMLLADVDSIREVIL FPALRQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-102 | 48 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-78 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysU | YP_003431842.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-102 | 48 |
