Gene Information

Name : glnA (HTH_1585)
Accession : YP_003433234.1
Strain : Hydrogenobacter thermophilus TK-6
Genome accession: NC_013799
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1448407 - 1449816 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGCCCAAGTACTCGCCGGAAGAGGTGCTAAACCTCATTGAGCAGGAAGGGATCCAGTATGTGGATCTGCGGTTTTCTGA
CCTTTTTGGTCAGTGGCAACACCTTACCATACCTGCATACGAACTTTCTCTGGACACCTTTGAGAACGGAAGAGGTTTTG
ACGGCTCTTCCATAAGAGGTTGGCAGTCCATACACGAGTCAGACATGCTTGCCTTTCCTGATGCCTCTACAGCTTTTGTA
GATCCTTTTATGGAGCCAAAAACCCTCGTGATGATATGTGATATATACGACCCTATAACCAGGGAGCGCTACGGCAGAGA
CACGCGCTACATAGCCCAGAAGGCAGAGCAGTATCTCAAGCAAACTGGCATAGGAGATACAGCTTACTACGGACCAGAGG
CGGAGTTTTTTATGTTTGACTCTGTAGAGTTTGGCACATCTGCTAACTACGCCTTTTGGAAGGTAGACTCCGAAGAAGGC
TGGTGGAACAGAGAGATAACCTCCTCTGGCTATAAGATACCCCACAAGAGGGGGTACTTCCCAGCACCACCCTTAGATAA
AACTCACCACCTGAGGAGTGAGATGGTATCCATCATGTCTCAGCTGGGTATAGTGGTGGAGCTACACCACCACGAGGTGG
CAACAGCAGGACAGGCAGAGATAGACATACGCTACGATTCTCTGGTAAATCAGGCTGACAAACTCTTTATATACAAGTAT
GTAGTTAGGATGGTTGCCAGCAAGTACGGCAAGTTTGCCACCTTCATGCCAAAGGTTTTACCCAACGACAACGGTTCTGG
TATGCACACCCACTTCTCCATATGGAAGGAAGGGCAGAATCTTTTTGCAGGTTCAGAGTATGCTGGGGTCTCGGAACTCT
GTCTTTATGCCATAGGTGGTATTCTCAAACACGGACCCGCTCTTACAGCCTTTACCAACCCAACTATAAACTCCTACCAC
AGGCTTGTACCCGGCTTTGAAGCGCCCGTAAGGCTTGCCTACTCTGCAAGGAACCGTTCCGCTGCCATAAGGATACCCAT
GTATTCCCAGTCTCCAAAGGCTAAAAGGATTGAAATACGCTTCCCAGACCCCACCTGCAACCCTTATCTGGCCTTTGCTG
CCATCCTGATGGCTGCCATAGACGGCATAGAAAACCGCATACACCCCGGAGAGCCCTTTGACAAGGACATTTACTCCCTC
CCACCCGAAGAGCTAAAGGACATACCTCAACTGCCCGGTTCTCTGGAAGACTCTCTCAAGGCTCTGGAAAAAGACTACGA
GTTTCTACTCAAAGGTGGTGTCTTCACTGAAGATCTCATACAAACTTGGATAGACTCCAAGCGCAAAGAGATAGACGAGA
TAAGGTTCATACCCCATCCTAAGGAGTTTGAGCTTTACTTTGACATTTAA

Protein sequence :
MPKYSPEEVLNLIEQEGIQYVDLRFSDLFGQWQHLTIPAYELSLDTFENGRGFDGSSIRGWQSIHESDMLAFPDASTAFV
DPFMEPKTLVMICDIYDPITRERYGRDTRYIAQKAEQYLKQTGIGDTAYYGPEAEFFMFDSVEFGTSANYAFWKVDSEEG
WWNREITSSGYKIPHKRGYFPAPPLDKTHHLRSEMVSIMSQLGIVVELHHHEVATAGQAEIDIRYDSLVNQADKLFIYKY
VVRMVASKYGKFATFMPKVLPNDNGSGMHTHFSIWKEGQNLFAGSEYAGVSELCLYAIGGILKHGPALTAFTNPTINSYH
RLVPGFEAPVRLAYSARNRSAAIRIPMYSQSPKAKRIEIRFPDPTCNPYLAFAAILMAAIDGIENRIHPGEPFDKDIYSL
PPEELKDIPQLPGSLEDSLKALEKDYEFLLKGGVFTEDLIQTWIDSKRKEIDEIRFIPHPKEFELYFDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-92 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_003433234.1 glutamine synthetase VFG1399 Protein 1e-114 53