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Name : clpC (HTH_1572) Accession : YP_003433222.1 Strain : Hydrogenobacter thermophilus TK-6 Genome accession: NC_013799 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1433081 - 1435525 bp Length : 2445 bp Strand : - Note : - DNA sequence : ATGTTTGAGAAGTTTACTGAGAAAGCAAGGCAAGTTATTTTGCAGGCAAGGGAAGAGGCTCTTGAGCTTGGACATACATA CCTTGGTAGTGAGCACATCCTACTTGCTCTAATAAAGGACGAAGACCTTCCCACCATCATACTCTCCAAGTTCGGACTCA CCTCTGATAAAGTCAGGAAAGCCATCATGGGACAGATAACAAGAGGCTCTCACTCGGGAGAGATACTCTTTGCTCCCGAT GCCAAAAGGGTGCTTGAGTTTGCGGTTGAAGAGGCTCGCATACTGCACCATCAGTTTGTTGGTCCAGAACATCTTCTCAT AGGTGTGGTCAGAGAAAAGACAGGTTTGGGCGGAAGAATTCTGAGAGGTTTTGGGCTTGATGAGTACTCGGTGAGAAGAG AAGTTCTGCAGATACTCGGTGAGCTACCACCTCAGGAGAGTGTGAAATACGCACCCACTCCAAACCTTGACAGGTTTTCA AGAGACCTAACCCAGATGGCAAGAGAAGGAAAGCTTGACCCGGTGGTAGGCAGGGAGAAGGAGATAGAAAGGGTAATACA GATACTGGTCAGAAGAAGGAAGAACAATCCAGTGCTTCTGGGAGACCCCGGCGTGGGTAAAACTGCAATAGTGGAGGGAC TGGCACAGAGGATAGCCAACAGGGAAGTGCCAGAGCATCTGCAAAACAAAAGAGTTGTGGCTCTTGACCTTGCTGCTTTG GTGGCGGGTACCAAGTACAGGGGTCAGTTTGAGGAGAGACTCAAAAACATTCTCAAAGAGCTGGAGAAAGCTCCCAATGT TATACTCTTCATAGACGAGATACACACCCTTGTAGGTGCTGGCTCTGCGGAGGGCTCCATTGATGCATCCAACATGCTAA AACCAGCTCTGGCGAGGGGTGAGATACAGGTTATAGGTGCCACCACCCTTGATGAGTACAGGAAGTACATAGAAAAGGAT GGTGCCTTGGAAAGGAGGTTCCAGCCAGTTTTGGTGGACCAGCCCAGCGAAGAAGATGCCATAAAGATACTCTACGGGCT AAAGCAGAAGTTTGAGGAGTTTCATAATGTGGAGTATACATCATCTGCAATAGAAAAGGCTGTTCAGCTTTCTGTCAGAT ACATAACGGAGAGGAATTTGCCCGATAAAGCTATTGATGTTATAGACGAGGCCGGATCTCTGGTAAAACTGAGAGCTATG AACTTACCACCTGACCTTAAGGCTCTTGAGGAGAGGATAAAGGAGATTGAGCTGGAGAAGGAGAACGCTGCCAACGAGCA GGATTATGAAAAGGCTGCAAGACTCAGAGATGAAGAGTTAAGGCTAAGAGCTAAGCTTGAAAGCCTAAAAACCAAGTGGA AACAGGAAATTGCAAAGAATAGACCGCAAGTTACCGAAGAGGATGTGGCAGAAGTGGTATCAAGGTGGACAGGCATACCC GTAAAGCGTGTTCACGAGAGTGATATGGAAAAGCTCCTTCACATAGAAGAAGAACTCAAAAAGAGGGTGATAGGTCAGGA TGATGCCATAAAGGCAGTTGCAAGAGCAATAAGAAGGTCAAGAGTGGGGCTAAAAGGCAGACACAGACCCATAGGCGTTT TCCTCTTTTTGGGTCCTACTGGAGTGGGTAAAACGGAAACTGCCAAGGCATTGGCAGAGTATCTATTTGGCACAGAAGAT GCTCTTGTGAGGTTTGATATGTCCGAATATATGGAGAAGCACACGGTTTCAAGACTCATAGGAGCACCCCCAGGCTATGT AGGTTACGAAGAGGGGGGACAGCTAACCGAAAGAGTTAGAAGGAGACCCTACTCGGTTCTTCTGTTTGACGAGATAGAAA AAGCTCACCATGATGTGTTTAACATCTTCCTGCAGATTTTTGACGATGGCAGGCTTACCGACGCTATGGGCAGGACGGTG GACTTTTCTAACACCATTATCATCATGACCTCCAACCTGGGTGCAAGGCTGATAGCTCACGGTGGAAAGATGGGCTTTGA GCAAAAATTCGGCGTTATAGACTTTGAACAGATGAAAAAGAATGTGATGGAGCAGGTAAAAAAGACATTTAATCCCGAGT TTCTCAACCGGCTTGACGAGATCATAGTTTACAGATCTCTGGAGAAGGAGGATGTGGCAAAAATACTGGAGCTTCAGCTC AAAGAGGTAAACAAAAACTTGCAAGACTGGAGTATAAGTGTAAAACTCCACAAAAGCTTTGTAGATTGGCTCATAGACAG AGAGTATAAACCTGAGTACGGAGCAAGGAGTCTAAAGCGTGCTCTGCAGCACCATGTTGAGGACCTTCTGGCGGAAGAGC TTCTTAAAGGAAGTCTCAAAGATGTGGATACGGTAGAGATCAGGATAAAAGACGATAAGCCATATATTAAACCTCTGAAG AAAAAGGAAAAGCTGGAAGCCATATTCAGTGAGAAGGTGGAGTAA Protein sequence : MFEKFTEKARQVILQAREEALELGHTYLGSEHILLALIKDEDLPTIILSKFGLTSDKVRKAIMGQITRGSHSGEILFAPD AKRVLEFAVEEARILHHQFVGPEHLLIGVVREKTGLGGRILRGFGLDEYSVRREVLQILGELPPQESVKYAPTPNLDRFS RDLTQMAREGKLDPVVGREKEIERVIQILVRRRKNNPVLLGDPGVGKTAIVEGLAQRIANREVPEHLQNKRVVALDLAAL VAGTKYRGQFEERLKNILKELEKAPNVILFIDEIHTLVGAGSAEGSIDASNMLKPALARGEIQVIGATTLDEYRKYIEKD GALERRFQPVLVDQPSEEDAIKILYGLKQKFEEFHNVEYTSSAIEKAVQLSVRYITERNLPDKAIDVIDEAGSLVKLRAM NLPPDLKALEERIKEIELEKENAANEQDYEKAARLRDEELRLRAKLESLKTKWKQEIAKNRPQVTEEDVAEVVSRWTGIP VKRVHESDMEKLLHIEEELKKRVIGQDDAIKAVARAIRRSRVGLKGRHRPIGVFLFLGPTGVGKTETAKALAEYLFGTED ALVRFDMSEYMEKHTVSRLIGAPPGYVGYEEGGQLTERVRRRPYSVLLFDEIEKAHHDVFNIFLQIFDDGRLTDAMGRTV DFSNTIIIMTSNLGARLIAHGGKMGFEQKFGVIDFEQMKKNVMEQVKKTFNPEFLNRLDEIIVYRSLEKEDVAKILELQL KEVNKNLQDWSISVKLHKSFVDWLIDREYKPEYGARSLKRALQHHVEDLLAEELLKGSLKDVDTVEIRIKDDKPYIKPLK KKEKLEAIFSEKVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-176 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_003433222.1 | ATP-dependent Clp protease | VFG0079 | Protein | 0.0 | 54 |
| clpC | YP_003433222.1 | ATP-dependent Clp protease | VFG0080 | Protein | 2e-149 | 54 |
