|
Name : GALLO_2033 (GALLO_2033) Accession : YP_003431441.1 Strain : Streptococcus gallolyticus UCN34 Genome accession: NC_013798 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3666 EC number : - Position : 2105328 - 2107016 bp Length : 1689 bp Strand : - Note : - DNA sequence : ATGTATAAAGAGTATAACACAAATCAGTTGAGTTTGGAACTCAATCTTGCTTACGATATTCCCATGAATCATGAAGCTAG ACTCATTAGTCTTTTTGTGGATAGTATCCCTAATCATGTACTACTAGAAGATAAGTCTCATACGGGTCGCCCCGCTTTTC ATCCAGCTATGCTTTTAAAAATGACACTTTTTGCTTATGCTCGTCAGGTCTTTTCGGGTCGCAAAATCGTTCAGATGAAT GATGAAGTGATTCCAATGAAATGGTTAAGTCAGGACACCTATGTTAGTTATAAGACCATCAATAATTTCCGTTCTAGTAA GCATGCTAATAACCTGATTAAGACCGCCTTTATTTACTTCACCCTGCTTATGCGTGAGAATGGCATAATTGAAGACGATG CTCTCTTTATCGACGGCACCAAGTTAGAAGCTGATGCCAATCTCTATTCATTTACTTGGAAAAAGGCAATTAATAAGTAC GAAGAAGCATTGAATGATAAAACCGCTGAACTTTATGACACCCTTGTTCAAGAAGGGGTAGATTTAGCTCTCTCCAAAGA AGAATGCGAAACTAGTGAAGGATTAGTACACCTTTTAGAAGACACAGAGCAGGCCTTGGCGGAAGTTGAAAAAGCTATTT CTGAAGAGCCCAAAGTTATCAAAGGAGGCTCTGCTAACAAACAGAAGAGACGTCGTATCAAGAAACTCCGTAATCAATTG AAGAAAGATTACCTTCCTCGTAAACAGCGATATGAGAAGAATAGAGAAATTCTTAAGGAACGAAACTCCTTCTCTAAAAC AGACCATGATGCCACCTTTATGCGAATGAAAGAAGATCATATGATGAACGGTCAGCTCAAACCTGGCTACAATGTCCAAG CTGCCACCAATGGTCAATATGTGCTTGCCTATGACATTTTTTCAAATCCAACAGATACTAGAACTTTAAAGCCATTCCTC AACTCTATCCAAACTCTGGATTTGTTCCAACATATTGTAGCCGATGCAGGTTATGGAAGTGAAGAAAACTATGTTTTTAT CATGGATGAGCTGGAAAAAACACCTCTAATCCCTTATGGCATGTATCAAAAAGAATTAAGGAGGAAATATAAGAACAGTC CTAATAATCCCTGTAATTGGAATTATCTTGAAGAAACCGACCAGTTTATAAAACCAGACGGAGTGATTTATTCTTTTAAG AGCTACTCTCGTCGATGTGACAAGTATGGCTTTAAACGTGACTTTAAAATCTATGAGGCAGATAAACTACAAGACACACC AGAGTTGGAAGAACTTGCCAAAACAGAAGGTGGCAATCAGAAACACATTTATTACAATCCAACTTGGAATTACTTTAAAG AACTCATAAAGGAAAAATTGAATAGCGAAGAAGGCTCTCGTATCTACGCCAAACGGAAAACTGATGTCGAACCCGTTTTT GGTAGATTGAAGAGTGTTTTTGGCGTTCGCAGAGTCCACGTTAGAGGGAGACAAGCCGTTCAAACAGAGATTGGATTTCT CTTCATGAGTATGAATCTAACAAAATTGGCTAAGAATCTAGCCTTAAGAACGTTAAACACTCAAAAACCACACAGTGATT TTATCATCTTGATTGTTTTCAAGACTGAAATCGTTGTGTGGTTTTATTTTAAAGCTAGTTTTTGCCCAACCTCTTTATAT TTATATTAA Protein sequence : MYKEYNTNQLSLELNLAYDIPMNHEARLISLFVDSIPNHVLLEDKSHTGRPAFHPAMLLKMTLFAYARQVFSGRKIVQMN DEVIPMKWLSQDTYVSYKTINNFRSSKHANNLIKTAFIYFTLLMRENGIIEDDALFIDGTKLEADANLYSFTWKKAINKY EEALNDKTAELYDTLVQEGVDLALSKEECETSEGLVHLLEDTEQALAEVEKAISEEPKVIKGGSANKQKRRRIKKLRNQL KKDYLPRKQRYEKNREILKERNSFSKTDHDATFMRMKEDHMMNGQLKPGYNVQAATNGQYVLAYDIFSNPTDTRTLKPFL NSIQTLDLFQHIVADAGYGSEENYVFIMDELEKTPLIPYGMYQKELRRKYKNSPNNPCNWNYLEETDQFIKPDGVIYSFK SYSRRCDKYGFKRDFKIYEADKLQDTPELEELAKTEGGNQKHIYYNPTWNYFKELIKEKLNSEEGSRIYAKRKTDVEPVF GRLKSVFGVRRVHVRGRQAVQTEIGFLFMSMNLTKLAKNLALRTLNTQKPHSDFIILIVFKTEIVVWFYFKASFCPTSLY LY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 4e-84 | 46 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 3e-85 | 45 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 1e-86 | 45 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 1e-86 | 45 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 1e-86 | 45 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 8e-87 | 45 |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | Protein | 2e-89 | 42 |
