Gene Information

Name : covR (GALLO_1826)
Accession : YP_003431239.1
Strain : Streptococcus gallolyticus UCN34
Genome accession: NC_013798
Putative virulence/resistance : Virulence
Product : two-component response regulator, CovR family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1899802 - 1900494 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTAAAAAGATTTTAATTATTGAAGATGAAAAAAATCTTGCACGCTTTGTGTCTTTGGAGTTACAACACGAAGGTTA
TTCTGTAGTTGTAGAAACAAACGGGCGCTTAGGGCTTCAAACGGCTCTTGATGACGATTTTGACTTGATTTTGCTTGATT
TAATGCTTCCAGATATGGATGGATTTGAAATCACGCGTCGTCTTCGATTGGAAAAAGAAACTTCTATTATTATGATGACA
GCTCGCGACTCTATTATGGATATTGTTGCTGGGCTTGATCGTGGTGCAGATGACTATATTGTCAAACCATTTGCAATTGA
AGAACTCTTGGCTCGTGTTCGTGCTGTTTTCCGCCGTCAAGATGTTGAATCTAAACGTGAACAAGACAGTCAAGGAAAAG
AAGGATTGCTTGGTCTACGCTTAAATCCTCAAAATCGTTCAGCGGTTCGAGGTGATGATGAAATTTCGCTTACAAAACGT
GAGTACGATTTGTTAAGTGTTCTTTTGTCAAATGTTAATCGTGTAATGACACGTGAAGAACTGCTAGCCAGTGTTTGGAG
ATACGATACAGATATTGAGACAAATGTTGTTGATGTTTATATCCGTTACCTTCGCGGAAAAGTCGATATTCCAGGTAAAG
AATCTTACATTCAAACAGTTCGTGGAATGGGATACATTATTCGAGAAAAATAA

Protein sequence : 
MSKKILIIEDEKNLARFVSLELQHEGYSVVVETNGRLGLQTALDDDFDLILLDLMLPDMDGFEITRRLRLEKETSIIMMT
ARDSIMDIVAGLDRGADDYIVKPFAIEELLARVRAVFRRQDVESKREQDSQGKEGLLGLRLNPQNRSAVRGDDEISLTKR
EYDLLSVLLSNVNRVMTREELLASVWRYDTDIETNVVDVYIRYLRGKVDIPGKESYIQTVRGMGYIIREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-24 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-24 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
covR YP_003431239.1 two-component response regulator, CovR family HE999704.1.gene1528. Protein 2e-44 57
covR YP_003431239.1 two-component response regulator, CovR family AE015929.1.gene1106. Protein 2e-37 53
covR YP_003431239.1 two-component response regulator, CovR family NC_013450.8614146.p0 Protein 8e-39 52
covR YP_003431239.1 two-component response regulator, CovR family NC_002951.3238224.p0 Protein 8e-39 52
covR YP_003431239.1 two-component response regulator, CovR family NC_007793.3914065.p0 Protein 8e-39 52
covR YP_003431239.1 two-component response regulator, CovR family NC_002758.1121390.p0 Protein 8e-39 52
covR YP_003431239.1 two-component response regulator, CovR family NC_010079.5776364.p0 Protein 8e-39 52
covR YP_003431239.1 two-component response regulator, CovR family NC_002952.2859858.p0 Protein 8e-39 52
covR YP_003431239.1 two-component response regulator, CovR family NC_007622.3794948.p0 Protein 8e-39 52
covR YP_003431239.1 two-component response regulator, CovR family NC_003923.1003417.p0 Protein 8e-39 52
covR YP_003431239.1 two-component response regulator, CovR family NC_012469.1.7685629. Protein 6e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
covR YP_003431239.1 two-component response regulator, CovR family VFG0596 Protein 7e-25 44
covR YP_003431239.1 two-component response regulator, CovR family VFG1390 Protein 8e-31 41