Gene Information

Name : BpOF4_21834 (BpOF4_21834)
Accession : YP_003429254.1
Strain :
Genome accession: NC_013793
Putative virulence/resistance : Resistance
Product : cadmium efflux P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 62727 - 64898 bp
Length : 2172 bp
Strand : +
Note : COG2217 Cation transport ATPase

DNA sequence :
ATGTCTGATCAAAAGGCAATAACATCTGAACAAGAAATGAAGGCCTATCGTGTACAAGGTTTTACTTGCGCAAACTGCGC
GGGTAAATTCGAAAAAAATGTAAAACAGCTATCTGGAGTTGAGGATGCAAAAGTAAATTTTGGTGCATCTAAAATTGCTG
TTTATGGTAATGCAACGATAGAAGAACTAGAAAAAGCAGGTGCATTTGAGAATCTCAAAGTGACACCTGAAAAATCTGCT
CGCCAAGCATCACAAGAGGTAAAAGAAGATACGAAAGAAGATAAAGTGCCGTTTTATAAAAAGCATAGTACTCTACTTTA
TGCTTCCTTATTGATTGCCTTTGGTTATCTTTCCTCGTATGTGAATGGAGAAGAGAACATTGTTACTACCTTATTGTTTT
TAGCATCCATGTTTATCGGAGGATTATCACTTTTTAAAGTTGGTTTGCAAAACTTACTACGTTTTGAATTTGATATGAAA
ACCCTTATGACAGTGGCTGTTATAGGTGGTGCTATTATTGGAGAATGGGCAGAAGTTGCCATTGTTGTTATTCTCTTTGC
AATCAGTGAAGCACTTGAGCGATTCTCTATGGATAGAGCAAGACAATCGATTCGTTCATTAATGGATATCGCTCCTAAAG
AGGCACTTGTTAAACGTAATGGACAAGAAATAATGATTCATGTTGATGATATTGCTGTTGGGGATATCATGATTGTAAAA
CCTGGTCAAAAGATTGCGATGGATGGTGTAGTTGTAAGTGGGTACTCTGCCGTTAACCAAGCAGCTATTACAGGTGAATC
AGTCCCTGTCGAGAAAACGGTTGATAATGAAGTATTTGCAGGTACCTTAAATGAAGAAGGATTACTTGAAGTAGAAATAA
CGAAACTTGTAGAAGATACAACAATTTCTAAAATTATTCATCTTGTAGAGGAAGCACAAGGGGAACGTGCTCCTTCGCAA
GCATTTGTTGATAAATTCGCAAAATATTACACACCGATTATTATGATCATTGCAGCATTAGTTGCTATAGTCCCTCCATT
ATTCTTTGATGGCAGTTGGGAAACATGGATTTATCAAGGATTAGCTGTTCTTGTTGTTGGTTGTCCTTGTGCGTTGGTTA
TATCGACTCCTATTTCTATTGTTTCAGCGATTGGAAATGCTGCGAAAAAAGGGGTCCTTGTAAAAGGCGGAGTGTATTTA
GAAGAAATGGGCGCCTTAAAGGCTATTGCATTCGATAAAACAGGAACATTAACAAAAGGGGTCCCAGCTGTAACTGATTA
TAATGTGTTGAACAAACAGATAAATGAAAAAGAATTACTATCCATTATTACTGCATTGGAGTATCGTTCTCAGCATCCTC
TTGCTTCAGCCATCATGAAAAAAGCAGAAGAAGAAAACATTACTTATTCTGACGTACAGGTAGAGGATTTCTCTTCTATC
ACAGGAAAGGGTATAAAGGGTATCGTAAACGGGACGACTTATTACATCGGTAGCCCGAAACTCTTTAAGGAATTATTGAC
TAATGATTTCGATAAAGACTTAGAGCAAAATGTTACTACTCTTCAAAATCAAGGTAAGACAGCCATGATTATTGGAACCG
AAAAAGAAATACTTGCAGTTATTGCAGTTGCTGATGAAGTTCGTGAGTCAAGTAAGGAAATTCTTCAAAAGTTACATCAA
CTTGGAATCAAAAAAACAATTATGCTTACTGGTGATAACAAAGGTACTGCGAATGCTATCGGAGGGCAGGTTGGAGTATC
TGATATAGAGGCAGAATTAATGCCACAGGACAAATTAGACTTTATTAAACAGTTGAGATCCGAGTATGGCAACGTAGCAA
TGGTAGGAGATGGGGTCAATGATGCACCTGCATTGGCGGCCTCAACAGTTGGGATTGCAATGGGTGGAGCTGGTACAGAC
ACAGCCTTAGAAACTGCAGACGTCGCTCTAATGGGAGACGATTTAAGAAAACTTCCATTCACTGTAAAACTTAGCCGGAA
AACTCTTAATATCATCAAAGCTAACATTACTTTTGCAATTGCTATTAAATTTATTGCCTTACTATTGGTTATCCCAGGTT
GGTTAACGCTCTGGATTGCCATTCTTTCCGATATGGGCGCAACCCTTCTAGTAGCTCTAAATGGTTTGCGACTAATGAGA
GTGAAAGAATAA

Protein sequence :
MSDQKAITSEQEMKAYRVQGFTCANCAGKFEKNVKQLSGVEDAKVNFGASKIAVYGNATIEELEKAGAFENLKVTPEKSA
RQASQEVKEDTKEDKVPFYKKHSTLLYASLLIAFGYLSSYVNGEENIVTTLLFLASMFIGGLSLFKVGLQNLLRFEFDMK
TLMTVAVIGGAIIGEWAEVAIVVILFAISEALERFSMDRARQSIRSLMDIAPKEALVKRNGQEIMIHVDDIAVGDIMIVK
PGQKIAMDGVVVSGYSAVNQAAITGESVPVEKTVDNEVFAGTLNEEGLLEVEITKLVEDTTISKIIHLVEEAQGERAPSQ
AFVDKFAKYYTPIIMIIAALVAIVPPLFFDGSWETWIYQGLAVLVVGCPCALVISTPISIVSAIGNAAKKGVLVKGGVYL
EEMGALKAIAFDKTGTLTKGVPAVTDYNVLNKQINEKELLSIITALEYRSQHPLASAIMKKAEEENITYSDVQVEDFSSI
TGKGIKGIVNGTTYYIGSPKLFKELLTNDFDKDLEQNVTTLQNQGKTAMIIGTEKEILAVIAVADEVRESSKEILQKLHQ
LGIKKTIMLTGDNKGTANAIGGQVGVSDIEAELMPQDKLDFIKQLRSEYGNVAMVGDGVNDAPALAASTVGIAMGGAGTD
TALETADVALMGDDLRKLPFTVKLSRKTLNIIKANITFAIAIKFIALLLVIPGWLTLWIAILSDMGATLLVALNGLRLMR
VKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 0.0 87
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 0.0 83
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 0.0 83

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BpOF4_21834 YP_003429254.1 cadmium efflux P-type ATPase BAC0298 Protein 1e-128 49
BpOF4_21834 YP_003429254.1 cadmium efflux P-type ATPase BAC0092 Protein 5e-100 43