Gene Information

Name : BpOF4_20074 (BpOF4_20074)
Accession : YP_003428906.1
Strain :
Genome accession: NC_013792
Putative virulence/resistance : Resistance
Product : cadmium-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 19064 - 21238 bp
Length : 2175 bp
Strand : +
Note : COG2217 Cation transport ATPase

DNA sequence :
ATGTCTGAACAACAAGCAAAATTATCTGAAGAAGAAATGAAAACCTATCGCGTTCAAGGGTTTACCTGTGCAAATTGTGC
AGGAAAGTTTGAAAATAATGTTAAAAAACTTCCTGGAGTTCAGGACGCAAAAGTAAATTTTGGTGCGTCTAAGATATCTG
TTTACGGAGATGCAACGATTGAAGAATTAGAAAAAGCCGGTGCATTTGAGAATCTTAAAGTAAATCCTGAAAAATCTGCC
CGTCATGTTTCGCAAGAGGTAACCGATGATACAAAAGAAGAAAAAGTTCCATTTTATAAAAAGTATAGTACATTACTTTA
TTCAACTTCGTTCCTTGCTTTCGGTTATCTCTCCTACTTTGTAAATGGAGAAGAAAATCTTCTTACAACCCTATTATTTT
TAGCATCAATGTTGGTAGGTGGATTGTCGCTTTTTAAAGTAGGTTTGCAAAACTTATTACGCTTTGAATTTGACATGAAA
ACCCTTATGACAGTAGCTGTTATAGGTGGAGCCATTATTGGTGAATGGGGAGAAGTTGCTATTGTTGTCATTCTCTTTGC
TATCAGTGAAGAACTTGAACGATTTTCCATGGATAGAGCAAGAAATTCGATTCGTTCTCTAATGGATATCGCTCCTAAAG
AAGCACTCGTTAGACGTAATGGTCAAGAAATAATGATTCATGTCGATGAGATTGCTGTTGGTGATATCATGATTGTAAAA
CCTGGTGAAAAAATAGCGATGGATGGTGTAGTTGTAAATGGTTACTCTGCCGTCAACCAAGCAGCTATTACGGGTGAATC
AGTTCCCGTTGAAAAAACGGTTGACGATGAAGTATTTGCAGGTACTTTAAATGAAGAAGGATTACTTGAAATAAAAATAA
CGAAACTTGTAGAAGATACAACGATATCTAAAATTATTCATCTTGTAGAGGAAGCACAAGGAGAACGCGCTCCTTCGCAG
GCATTTGTCGATAAATTTGCAAAATATTACACACCCATCATTATGATCATTGCAGCATTAGTTGCTGTAGTCCCTCCCCT
ACTCTTAGGTAGTAGTTGGGAAACATGGGTTTATCAAGGATTGGCCGTTCTTGTTGTTGGTTGTCCATGTGCGTTGGTCA
TATCGACTCCGATTTCTATTGTTTCAGCAATTGGGAATGCTGCGAAAAAAGGTGTACTTGTAAAAGGCGGAGTGTATTTA
GAAGAAATGGGTGCTTTAAAGGCAATAGCATTTGATAAAACAGGTACATTAACAAAAGGTGTTCCCGTTGTAACTGATTT
TGATGTATTGAATAACCAAACGAATGAAAAAGATTTATTGGCGATTATTACTGCACTAGAGTATCGTTCCCAGCATCCCC
TTGCTTCAGCTATCATGAAAAAAGCAGAAGAAGAAAACATTTTATATTCTAAAGTACTGGTAGAGGATTTCTCATCTATT
ACAGGTAAGGGTATCAAAGGAATTGTAAATGGGATGACATATTATATCGGTAGCCCGAAACTCTTTAGGGAATTATTAAC
TACTGATTTCGATAAAGACTTAGAACAAAATATTACTGCTCTTCAAAATCAAGGTAAAACAGCAATGATTATTGGAACTG
AAAAAGAAATACTTGGAATTATTGCAGTTGCTGATGAAGTCCGTGAATCAAGCAAGGACATTATTCAAAAGTTACATCAA
CTTGGTATCAAAAAGACTATTATGCTTACAGGTGATAACAAAGGTACGGCGAATGCAATAGGAAGTCATGTTGGAGTATC
TGATATCCGAGCCGATCTGATGCCTCAGGACAAATTAGAATATATAAAACAATTAAGGGCCGACTTTGGGAATGTCGCCA
TGGTTGGAGATGGTGTCAATGATGCACCTGCATTGGCAGCCTCAACAGTCGGTATCGCAATGGGTGGAGCCGGTACAGAC
ACAGCCTTAGAAACGGCAGACGTCGCTCTAATGGGAGACGATTTAAGAAAACTTCCATTCACTGTAAAACTTAGCCGAAA
AGCTCTTAATATCATCAAAGCTAACATTACTTTCGCCATTGCTATTAAATTTATTGCCTTACTATTGGTTATCCCAGGTT
GGTTAACACTTTGGATTGCCATCCTTTCAGATATGGGGGCGACCATTCTAGTAGCGCTAAATGGTTTGCGCCTAATGAGA
GTGAAAGAAGAATAA

Protein sequence :
MSEQQAKLSEEEMKTYRVQGFTCANCAGKFENNVKKLPGVQDAKVNFGASKISVYGDATIEELEKAGAFENLKVNPEKSA
RHVSQEVTDDTKEEKVPFYKKYSTLLYSTSFLAFGYLSYFVNGEENLLTTLLFLASMLVGGLSLFKVGLQNLLRFEFDMK
TLMTVAVIGGAIIGEWGEVAIVVILFAISEELERFSMDRARNSIRSLMDIAPKEALVRRNGQEIMIHVDEIAVGDIMIVK
PGEKIAMDGVVVNGYSAVNQAAITGESVPVEKTVDDEVFAGTLNEEGLLEIKITKLVEDTTISKIIHLVEEAQGERAPSQ
AFVDKFAKYYTPIIMIIAALVAVVPPLLLGSSWETWVYQGLAVLVVGCPCALVISTPISIVSAIGNAAKKGVLVKGGVYL
EEMGALKAIAFDKTGTLTKGVPVVTDFDVLNNQTNEKDLLAIITALEYRSQHPLASAIMKKAEEENILYSKVLVEDFSSI
TGKGIKGIVNGMTYYIGSPKLFRELLTTDFDKDLEQNITALQNQGKTAMIIGTEKEILGIIAVADEVRESSKDIIQKLHQ
LGIKKTIMLTGDNKGTANAIGSHVGVSDIRADLMPQDKLEYIKQLRADFGNVAMVGDGVNDAPALAASTVGIAMGGAGTD
TALETADVALMGDDLRKLPFTVKLSRKALNIIKANITFAIAIKFIALLLVIPGWLTLWIAILSDMGATILVALNGLRLMR
VKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 0.0 85
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 0.0 81
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 0.0 81

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BpOF4_20074 YP_003428906.1 cadmium-transporting ATPase BAC0298 Protein 3e-127 48
BpOF4_20074 YP_003428906.1 cadmium-transporting ATPase BAC0092 Protein 5e-100 44
BpOF4_20074 YP_003428906.1 cadmium-transporting ATPase BAC0124 Protein 2e-90 42
BpOF4_20074 YP_003428906.1 cadmium-transporting ATPase BAC0100 Protein 3e-70 41