Gene Information

Name : BpOF4_20049 (BpOF4_20049)
Accession : YP_003428901.1
Strain :
Genome accession: NC_013792
Putative virulence/resistance : Unknown
Product : transposition regulatory protein TnpA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 14319 - 15425 bp
Length : 1107 bp
Strand : +
Note : COG0582 Integrase

DNA sequence :
ATGAAAAGATACATGTTACTGGATGACAAAGGGCTGCTAGTCCTTCCGGTGATGAAATACATAAAATACCTAGATACACG
GGGAAAAAGCCCAAATACTCAAAAAACGTACTGTTATGCATTAAAGGAGTATTTTACATTCTTAGAGGATGTCAACCTGG
GATATAAAGATGTAAGATTAGAAGATTTGGTGGACTTTATTGCATGGCTTCGGAATCCATACGGAATTAATAAAGCAGTG
CCACTTCAACCAACTGAAGCCAGAAAAAAGGAAAACACTATCAATCTAATTCTTACAGCTGTAAATGGTTTTTATGACTA
TTTATATCGAAATGAAGAGTTAGATAAAGCCATGGTTGATTTAGTCACGAAAGAACAATTATTTAAAGGGGCAAAGAGGG
CATATAGAGATTTCCTCTACCATGTTAATCAAAATAGTCCTTCGCATAAAAACGTCCTGAGGGTCAAGAAGAGGAAAGTA
AAGTTAAAAGTGTTGTCAAAAATGGAAGTTGAAATGCTCTATAATGGAGCAACGAATATTAGGGATAAGTTGTTAATACA
AACTCTATATGAGACGGGCTTACGAATTGGAGAATTACTTTCGCTTTTTATTGAGGATTTTATATTTGATCATAAGGGCG
GTCATAGGATTAAGCTTGTTGACCGTGGTGAGCTTGAAAATGGTGCCAAACTAAAAACTAGCGAAAGGGAAATTTATGTA
TCGCAATCACTTATGGACCTATTAGACGATTATCTTTATGAAGTGATTGACGATCTTGATATTGATACGAATTTCGTCTT
TGTAAAATTAAAGGGAAAAAATATTGGACACCCAATGAATTATCAAAATGTTTCTGCTCTATTCAAACGGCTACGGAAAA
AAGTCAAATTCAAGGTCCATCCACACCTTCTTAGGCATACTCACGCAACCATGTATTACAGACAAACTGGCGACATTAAA
CAGGTGCAAGAGCGTATAGGGCATAGCCAAATTCAAACGACTATAAATTTTTATCTTCATCCTTCCGAAGAAGATATCCG
AAATAACTGGGAAAAGGCTCAGTCAGCGTTTCAAATCGGCAGTAAAGAATATAGTAATGGGGAGTAA

Protein sequence :
MKRYMLLDDKGLLVLPVMKYIKYLDTRGKSPNTQKTYCYALKEYFTFLEDVNLGYKDVRLEDLVDFIAWLRNPYGINKAV
PLQPTEARKKENTINLILTAVNGFYDYLYRNEELDKAMVDLVTKEQLFKGAKRAYRDFLYHVNQNSPSHKNVLRVKKRKV
KLKVLSKMEVEMLYNGATNIRDKLLIQTLYETGLRIGELLSLFIEDFIFDHKGGHRIKLVDRGELENGAKLKTSEREIYV
SQSLMDLLDDYLYEVIDDLDIDTNFVFVKLKGKNIGHPMNYQNVSALFKRLRKKVKFKVHPHLLRHTHATMYYRQTGDIK
QVQERIGHSQIQTTINFYLHPSEEDIRNNWEKAQSAFQIGSKEYSNGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA-3 YP_190048.1 transposase A Not tested Type-II SCCmec Protein 3e-46 42
tnpA BAB47667.1 transposase A(Tn554) Not tested Type-III SCCmec Protein 2e-46 42
tnpA BAC53829.1 transposase A(Tn554) Not tested SRImec-III and SCCmec-III region Protein 2e-46 42
tnpA BAC57491.1 transposaseA Not tested Type-IIIinv SCCmec Protein 2e-46 42
unnamed BAA82201.1 transposaseA Not tested Type-II SCCmec Protein 2e-46 42
tnpA1 YP_039526.1 transposase A 1 Not tested Type-II SCCmec Protein 3e-46 42
tnpA NP_370580.1 transposase A Not tested Type-II SCCmec Protein 3e-46 42
tnpA NP_373292.1 transposase A for Tn554 Not tested Type-II SCCmec Protein 3e-46 42