Gene Information

Name : BpOF4_20504 (BpOF4_20504)
Accession : YP_003428988.1
Strain :
Genome accession: NC_013792
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding lipoprotein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 103187 - 104119 bp
Length : 933 bp
Strand : -
Note : COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin

DNA sequence :
ATGAGAAATTTATTATTTATTACTACAATTCTTACACTGTTTTTACTTGGGGCATGTGGTAGTAAACCGACTGGTCAAGA
AGAAAGTACGAATCAAAAATTGGAGGTTGTCACGACTTATTCTATTATTTATGATATTACAAAAAATGTCGGAGGAGATA
TAGTAGAAATTTATAATTTAACCCCCATCGGTGCAGATCCACACGAATATGACCCACTTCCAGAGGATGTTAAGAAAACA
ACTGATGCAGATGTTGTCTTTTATAATGGGTTAAACTTAGAAGAAGGAAACGGATGGTTTAGGAAGTTAATTGAAGTTGC
TGGAAAAGGAGATGAGGATGCACCCGTTTATCTAGTGAGTGAAGGAGTAGTACCGATTCTTTTAGAATCCCAAGGCTTAG
AAGAGGAAGCTGATCCACATGCTTGGCTCGATTTGCGTAACGGAATTACGTATACTGAAAATATACGCGATGCATTAATT
AAAGAAGACCCCGAGAATGAGAGTATTTATGTAGAAAATGCTACTCAATATATACAAGAGCTATCCGAACTGCATGAGAA
AGCGATTGAAAGCATTGCGACTATCGATGAGAATAAGCGATTTTTAATTACAAGTGAAGGGGCATTTAAATATTTTGGTG
CCGCCTATGACATAGAAACAGGGTATATTTGGGAAATTAATTCTGAAAATCAAGGCTCTCCTCAACAAATGCGTGATGTA
ATAGATCTAGTGCGAGATAAAGGGATAACATCTCTTTTTATTGAAACAAGTGTAGATCGCCGTACCATGGAAACTGTATC
ACAAGAAACGGGTGTACCTATTGTAGGCACTGTTTATACAGATTCTCTTGGAAAAGAAGGAACAGATGGGGATACTTATT
TAAAAATGATGGAGTCAAACATTAATGTAATTATTGAAGGTTTAAGTAAGTGA

Protein sequence :
MRNLLFITTILTLFLLGACGSKPTGQEESTNQKLEVVTTYSIIYDITKNVGGDIVEIYNLTPIGADPHEYDPLPEDVKKT
TDADVVFYNGLNLEEGNGWFRKLIEVAGKGDEDAPVYLVSEGVVPILLESQGLEEEADPHAWLDLRNGITYTENIRDALI
KEDPENESIYVENATQYIQELSELHEKAIESIATIDENKRFLITSEGAFKYFGAAYDIETGYIWEINSENQGSPQQMRDV
IDLVRDKGITSLFIETSVDRRTMETVSQETGVPIVGTVYTDSLGKEGTDGDTYLKMMESNINVIIEGLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 9e-67 47
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 7e-67 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BpOF4_20504 YP_003428988.1 manganese ABC transporter substrate-binding lipoprotein VFG2157 Protein 2e-76 52
BpOF4_20504 YP_003428988.1 manganese ABC transporter substrate-binding lipoprotein VFG2165 Protein 2e-72 52
BpOF4_20504 YP_003428988.1 manganese ABC transporter substrate-binding lipoprotein VFG1359 Protein 1e-68 47