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Name : lysS (BpOF4_08385) Accession : YP_003426627.1 Strain : Bacillus pseudofirmus OF4 Genome accession: NC_013791 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 95340 - 96839 bp Length : 1500 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAGCCAAGAGGTCGAATTAAATGATTTACTTGCCGTACGAAGAGACAAGCTTTCTCAATTAGAAGCACAAGGAGCAAA CCCGTTCGGCGGCCGTTTTGAGAGAACCCATACAGCCAAAACAATGGAGAGTACATTTACAGAGTTATCTAAAGAAGAAT TAGAAGAGCAAGGTCATGAAGTAACGCTGGCTGGACGTATTATGACTAAGCGTGGAAAAGGGAAAGCTGGTTTTGCCCAC ATCCAAGACTTATCTGGTCAAGTTCAAATTTATGTTCGTAAGGATGCAGTGGGTGAAGAGCAGTATGATCTTTTCACTTC TATTGATATTGGAGATATTGTAGGTGTAACAGGTACGGCTTTCAAAACAAAAGTAGGAGAGTTATCAGTTAAAGTAACTG ATTTTCAAATTCTTTCAAAATCATTACGCCCGCTTCCGGATAAGTTTCATGGCTTAAAAGATATTGAGCAACGTTACCGC CAACGTTATGTAGACTTAATAATGAACCCAGAAGTGCGTGATACGTTTGTATTACGTAGTAAAATATTGCAATCTATGCG CCGTTATTTAGATAATCGTGGATTCCTTGAAGTAGAAACTCCTACTATGCACTCGATTGCAGGCGGAGCATCTGCACGTC CTTTTGTCACGCATCACAATGCGTTAGACATGACTTTATATATGCGTATAGCAATTGAGCTTCACCTGAAGCGTCTTATT GTAGGCGGCATGGAGAAGGTATATGAGATCGGCCGTGTATTCCGTAATGAAGGGGTATCTACTAGACATAACCCAGAGTT TACAATGATTGAGTTATATGAAGCTTATGCAGACTATCAAGACATTATGGAGCTTACAGAAGAACTTGTCGCCCATATTG CTAGGGAAGTATTAGGGACAACAAAGGTCACATACGGTGAGTATGAAGTAGACCTAGAGCCTAAGTGGACTCGTGTGCAT ATGGTGGATGCTATTAAAGAAAAGAGCGGCGTTGATTTCTGGCCTGAAATGACTGATGAAGAAGCTCGTGCTCTTGCAAA AGAACACAAGGTACCGGTAAAAGAAACAATGACATACGGCCACGTTGTTAATGAGTTCTTTGAACACTTTGTTGAAGAGT CGCTTATTCAGCCTACATTTATATACGGCCACCCAACAGCCATCTCTCCTCTAGCTAAGAAAAATCCTGAAGACGAGCGT TTCACAGATCGTTTTGAGTTGTTTATTGTCGGACGTGAGCACGCGAATGCCTTCTCTGAGTTAAATGACCCTATTGATCA GCGCCAGCGCTTTGAGCAGCAGCTGGTTGAGCGCGAACAAGGCGATGATGAAGCTCATATGATGGATGAGGACTTTGTAG AGTCTCTTGAATATGGAATGCCTCCTACTGGTGGACTAGGGATCGGTATTGACCGTTTAGTAATGTTACTAACTAATTCC CCGTCTATTCGTGACGTGCTGCTATTCCCGCAAATGAGAAATCGTGAACAAAGTGAATAA Protein sequence : MSQEVELNDLLAVRRDKLSQLEAQGANPFGGRFERTHTAKTMESTFTELSKEELEEQGHEVTLAGRIMTKRGKGKAGFAH IQDLSGQVQIYVRKDAVGEEQYDLFTSIDIGDIVGVTGTAFKTKVGELSVKVTDFQILSKSLRPLPDKFHGLKDIEQRYR QRYVDLIMNPEVRDTFVLRSKILQSMRRYLDNRGFLEVETPTMHSIAGGASARPFVTHHNALDMTLYMRIAIELHLKRLI VGGMEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYQDIMELTEELVAHIAREVLGTTKVTYGEYEVDLEPKWTRVH MVDAIKEKSGVDFWPEMTDEEARALAKEHKVPVKETMTYGHVVNEFFEHFVEESLIQPTFIYGHPTAISPLAKKNPEDER FTDRFELFIVGREHANAFSELNDPIDQRQRFEQQLVEREQGDDEAHMMDEDFVESLEYGMPPTGGLGIGIDRLVMLLTNS PSIRDVLLFPQMRNREQSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-114 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003426627.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-114 | 51 |
