Gene Information

Name : clpE (BpOF4_12035)
Accession : YP_003427352.1
Strain : Bacillus pseudofirmus OF4
Genome accession: NC_013791
Putative virulence/resistance : Virulence
Product : AAA ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 847800 - 849956 bp
Length : 2157 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAAATGTCAAAACTGCGAACAACGACAAGCAACAGTGAATGTTAATATGCAATTCAATTCTGAGAAAAGGCAATTTAA
GTTATGCCAGACATGCTATCAAGAAATGCGTGCTGCAAATGGAATTCCATCAGGTTTTGGGCATGGATTTTCTCATATGC
CGTTCGATGACCTATTTAAGCAACTAACAAACAACCATATGAATGCAGCAGCTCATGATCCGAAACCATATCCACCCCAT
GCTGAATCTATGAATGGAGGGCATAAAGGAGGAGGCGGTTTCCTCGATCAATATGGGAAAAACGTGACGCAGGCTGCCAA
GGCTGGATTAATTGATCCTGTCATTGGACGTGATACAGAGATTGAACGCGTGATTGAGATATTAAACCGACGCAATAAAA
ACAACCCAGTGCTTATAGGGGAGCCTGGCGTTGGTAAAACAGCTATTGTAGAAGGTTTAGCATTAAAAATTGTTGAAGGT
CATGTTCCTTCAAAACTTTTAAATAAGGAAGTCATCCTATTAGATGTAGCATCACTTGTTGCCAATACAGGAATCCGCGG
CCAATTTGAAGAGCGGATGAATCAGCTTATCGCTGAGCTTAAAGAACGTAAAAATGTGATGCTGTTTATCGATGAAATTC
ATTTATTAGTAGGTGCTGGTTCTGCAGAGGGTTCTATGGATGCAGGCAATATTTTAAAGCCAGCTCTAGCGCGTGGCGAG
CTCCAAGTTGTTGGTGCAACAACGCTAAAAGAATACCGTGAAATCGAAAAAGATGCGGCCCTTGAACGTCGATTCCAGCC
TGTGATGGTCAATGAGCCGTCTATAGAAGATGCCATCAACATTTTAAAGGGTATTCAAAGTAAATATGAAGATTATCATC
AAGTAAGCTACACTGAAGATGCGATCAAAGCTTGTGTGAACTTATCACACCGCTATATTCAAGACCGCTTTTTACCTGAC
AAAGCGATTGATTTACTAGATGAAGCTGGTTCGAAGTTAAACTTGCAAGCAGGTGCAGCAAGCCACGACGATATTGAATC
ACGCCTTGCAGAAATTCATAAAGAAAAAGACAAGGCACTAAAAGAAGAGAACTATGAAGCAGCTGCAAAATTACGGGATG
AAGAAGTAAAGCTAGAAGCTAAACTAAATAAATCAGAAGATAAAAAAGCGAATGTAGACACAGCTCAAATTGAAGCCATT
ATTGAGAAGAAAACAGGGATTCCAGTCGGTAAACTGCAAGCAAACGATCAAGAAAAAATGAAAAACCTAGCGGATCAGCT
TCGCGGCAAGGTCATTGGACAAGAAAAAGCGGTTGAAAAAGTAGCCAAAGCCGTTCGCCGTTCACGTGCCGGCCTAAAAG
CAAAACACCGACCGATCGGATCCTTCTTATTTGTAGGTCCAACTGGTGTGGGTAAAACAGAATTAACTAAGTCATTAGCA
GAACAATTATTTGGTACAAAAGAGGCAATGGTTCGGCTTGATATGAGTGAGTACATGGAAAAACACTCTGTCTCTAAATT
AATTGGATCGCCGCCTGGATATGTAGGTCATGATGAGGCGGGTCAGTTAACAGAGAAAGTGCGCCGCAACCCGTACTCTA
TTATTCTGCTTGATGAAATTGAGAAAGCTCACCCTGATGTTCAGCATATGTTCCTGCAAATTTTAGAGGACGGGCGCTTA
ACTGACAGCCAAGGAAGAACAGTGAGCTTTAAAGATACAGTCATCATTATGACAAGCAACGCTGGTGTCGGAGTGAAAAA
GAAGACAGTTGGATTTGGCGCAAGCGAGGCTGTTGCCGAAACTTCCGTGCTTGATGCTTTATCAGCTTACTTCAAGCCAG
AATTCTTGAACCGCTTTGATGCGATCATCGAATTTAACCAGCTAAGCAAAGCAAATCTTGTACAAATTGTTGACCTATTG
CTCCTTGACCTTGAACACACATTATCTGAGCAAAACATTACAATGTCAGTGACTGCACCTGCTAAAGAAAAAATAGCAGA
ACTTGGCTATCATCCAGCATTTGGTGCGCGTCCGCTTCGCCGTGTGATTCAAGAGCAATTAGAAGATCAAATAACGGATC
TATTATTAGATGAAGAGGAAGTTAAAGCAATAGCTGTAGATGTAAAGGAAGATAAGATTGTCATAGCAAAGGCTTAA

Protein sequence :
MKCQNCEQRQATVNVNMQFNSEKRQFKLCQTCYQEMRAANGIPSGFGHGFSHMPFDDLFKQLTNNHMNAAAHDPKPYPPH
AESMNGGHKGGGGFLDQYGKNVTQAAKAGLIDPVIGRDTEIERVIEILNRRNKNNPVLIGEPGVGKTAIVEGLALKIVEG
HVPSKLLNKEVILLDVASLVANTGIRGQFEERMNQLIAELKERKNVMLFIDEIHLLVGAGSAEGSMDAGNILKPALARGE
LQVVGATTLKEYREIEKDAALERRFQPVMVNEPSIEDAINILKGIQSKYEDYHQVSYTEDAIKACVNLSHRYIQDRFLPD
KAIDLLDEAGSKLNLQAGAASHDDIESRLAEIHKEKDKALKEENYEAAAKLRDEEVKLEAKLNKSEDKKANVDTAQIEAI
IEKKTGIPVGKLQANDQEKMKNLADQLRGKVIGQEKAVEKVAKAVRRSRAGLKAKHRPIGSFLFVGPTGVGKTELTKSLA
EQLFGTKEAMVRLDMSEYMEKHSVSKLIGSPPGYVGHDEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRL
TDSQGRTVSFKDTVIIMTSNAGVGVKKKTVGFGASEAVAETSVLDALSAYFKPEFLNRFDAIIEFNQLSKANLVQIVDLL
LLDLEHTLSEQNITMSVTAPAKEKIAELGYHPAFGARPLRRVIQEQLEDQITDLLLDEEEVKAIAVDVKEDKIVIAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-155 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpE YP_003427352.1 AAA ATPase VFG0080 Protein 0.0 63
clpE YP_003427352.1 AAA ATPase VFG0079 Protein 2e-160 52