Gene Information

Name : cpsC (BpOF4_06620)
Accession : YP_003426274.1
Strain : Bacillus pseudofirmus OF4
Genome accession: NC_013791
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG4464
EC number : -
Position : 3596293 - 3597057 bp
Length : 765 bp
Strand : -
Note : COG4464 Capsular polysaccharide biosynthesis protein

DNA sequence : 
ATGATCGACATACATAGTCATATATTACCCGGATTAGACGATGGGCCAGAAAGTATGACGAGCGCGGTCGAAATGGCTAG
AAAAGCAGTGGAGCAAGGAATCACTGGAATGATCGCTACACCTCATCATCAAAACGGTACATATGAAAATCACTACGAAG
ATATCTTAGCTGCTGTTCATCGTTTTGAAGACGAGCTCAGAGCACACAAAATTGACTTACATATTGCACCCGGACAAGAA
GTACGCCTGTACGGAAATATTGTAGCGGATGCAGCTCATTCCCAATTAATCACACTTAATCAAACGAATCATCTTTTAAT
TGAATTACCGTCAGATCACGTACCAAGCTATACGGCACGTTACTTGTATGAGCTTCAGCTTCAAGGAATTAAGCCTGTCA
TTGCACACCCTGAGCGGAATCGTGAAATTGCAGCGGATTCTAGTAAGCTGTATGAACTGATCAAAAACGGAGCACTTGCT
CAAGTAACGGCTTCAAGTGTTGCCGGCCGCTTCGGACGGAATGTGAAGAAGCTCTCCATGCAGCTGATCGAGCATGAACT
TGTTCATTTTGTTGCATCAGATACTCATAACAACACAAACAGACCAAATGAATTAGCAAAATCCTTTGATGTGATAGAAA
AGGAGTTCGGCATGGGTGCTGTTTATACGTTAAAAGAAAATGCTGAGATTCTTGTCAGCGGCGGCTCGGTCTATGCAGGT
CCGCCATCACGTATTAAAAAGAAGAAAATTCTCGGGCTCTTTTAA

Protein sequence : 
MIDIHSHILPGLDDGPESMTSAVEMARKAVEQGITGMIATPHHQNGTYENHYEDILAAVHRFEDELRAHKIDLHIAPGQE
VRLYGNIVADAAHSQLITLNQTNHLLIELPSDHVPSYTARYLYELQLQGIKPVIAHPERNREIAADSSKLYELIKNGALA
QVTASSVAGRFGRNVKKLSMQLIEHELVHFVASDTHNNTNRPNELAKSFDVIEKEFGMGAVYTLKENAEILVSGGSVYAG
PPSRIKKKKILGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0062 YP_300152.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 3e-49 42
cap1C AAA64642.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cpsC YP_003426274.1 capsular polysaccharide biosynthesis protein VFG1299 Protein 1e-39 43