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Name : cpsD (BpOF4_06615) Accession : YP_003426273.1 Strain : Bacillus pseudofirmus OF4 Genome accession: NC_013791 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3594184 - 3596004 bp Length : 1821 bp Strand : - Note : COG1086 Predicted nucleoside-diphosphate sugar epimerases DNA sequence : ATGACGTATAAAAAACGAATTGCTTCCTTAATATTAGTAGACTCACTTATTGTTATCATTTCCATCTTTATTAGTAACTT TATCTTATTGCCAACAGGAAGCCCATTTACGACCGTATTAATTATCAGCTCTGTCGTTTTGCTTCTCAGTCATCATGCAT TTGCCCATATCTATAAATTGTATAAACGAGTATGGCAATATGCGAGCATGAATGAGCTGTACGGTATTTTCATGGTTGTT AATTTCTCAATTGCACTCACAGCTGTTGCACAGCTCATTATGATCCAAGACGTCTATTACCGGACACTTGCCATCACATG GATGATGCATATTCTTTTAATCGGAGGATCGCGCTTCTCGTGGAGGATGTACCGTGACACATACTTAAAGCCAAAGCTCG GAGGCAAGCGTACGCTGATTGTCGGTGCCGGAAATGCGGGAACGATGGTAGCCCGCCAGCTGCGTAACAGCGAAGATACA GAGCTTGATCCAATTGGCTTTGTTGATGATGATAATTACAAACAGCACCTAGAAATCATGAACCTGCCTGTACTGGGGGA AATCAAGAACATTCCCACGCTAGTAGAAGAGCTTCATGTTGAACATATCATTATTGCGATCCCGTCACTTAACCGCCAAG AGCTGAATGAGATCTTCGCTGTTTGTACACAAACAAAAGTGAAGACACAAATCCTGCCGAAAATGGAGGATCTGATTACT GGAAATGTCGAAGTGAATCAGTTCCGCGATGTCGAAGTAGAAGATCTCTTAGGCCGTGATCCAGTAGAGCTTGATATTGA AGGGATTGCAGACTATATCACCAACAAAACCGTGCTCGTAACCGGTGCCGGCGGATCCATCGGTTCTGAAATCTGCCGCC AAATTGCCCGCTTCTCACCAGAAGAACTCGTTCTTCTCGGACACGGTGAGAACAGCATTTACGCAATTGAAATGGAGCTA AGACGCAATCTGCCTGACTTAAACATCAAAACAGAAATTGCAGATATCCAAGACAGAGAAAAGATCTTCTCAATTATGGC CGCCCGCACACCGCATGTAGTATTCCATGCAGCGGCCCATAAGCATGTCCCATTAATGGAACGCAACCCTGAAGAAGCGG TCAAAAACAACGTACTCGGTACAAAAAATGTCGCAGAAGCAGCAAGTGCTGCCCATGTAAATACGTTCGTCATGATCTCA ACAGACAAAGCCGTTAATCCAACGAGCGTGATGGGTTCAACAAAACGAATTGCCGAGATGATCGTACAGCATATGGACAT GATCAGCGACACACGCTTCGTCGCTGTCCGCTTCGGAAACGTCCTAGGAAGCCGAGGCAGTGTCATCCCGTTATTCAAAG ACCAAATTAAAAACGGAGGACCGGTCACAGTAACTGACCCAGAAATGGTCCGCTACTTCATGACCATCCCAGAAGCATCA AGACTCGTCCTCCAAGCTGGCTCCCTCGCAAAAGGCGGAGAAGTTTTCGTCTTAGATATGGGAGAGCCGGTTAAAATTGT TGACCTAGCACGAAACTTAATTCGTCTATCAGGCTACACAGAAGAAGAAATCCCAATCGTCTTCACCGGCATGCGCCCAG GCGAAAAAATGTTCGAAGAGCTCCTAAGCAAAGACGAAGTACACGACGAGCAAGTCTATCCGAAGATTTACAGAGGAAAG ACGCCAGTGGTGGATATCAACGTCACATACGAACTAGCAAAAACATACGACGAATACACGAAAGAACAGCTAAGAGAAAG ACTGTTGGATATAGCTAATTTTAGGGTGAGGCAGTTGAAGGTACTGAGCGAAGCGAAGTGA Protein sequence : MTYKKRIASLILVDSLIVIISIFISNFILLPTGSPFTTVLIISSVVLLLSHHAFAHIYKLYKRVWQYASMNELYGIFMVV NFSIALTAVAQLIMIQDVYYRTLAITWMMHILLIGGSRFSWRMYRDTYLKPKLGGKRTLIVGAGNAGTMVARQLRNSEDT ELDPIGFVDDDNYKQHLEIMNLPVLGEIKNIPTLVEELHVEHIIIAIPSLNRQELNEIFAVCTQTKVKTQILPKMEDLIT GNVEVNQFRDVEVEDLLGRDPVELDIEGIADYITNKTVLVTGAGGSIGSEICRQIARFSPEELVLLGHGENSIYAIEMEL RRNLPDLNIKTEIADIQDREKIFSIMAARTPHVVFHAAAHKHVPLMERNPEEAVKNNVLGTKNVAEAASAAHVNTFVMIS TDKAVNPTSVMGSTKRIAEMIVQHMDMISDTRFVAVRFGNVLGSRGSVIPLFKDQIKNGGPVTVTDPEMVRYFMTIPEAS RLVLQAGSLAKGGEVFVLDMGEPVKIVDLARNLIRLSGYTEEEIPIVFTGMRPGEKMFEELLSKDEVHDEQVYPKIYRGK TPVVDINVTYELAKTYDEYTKEQLRERLLDIANFRVRQLKVLSEAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-136 | 59 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-132 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cpsD | YP_003426273.1 | capsular polysaccharide biosynthesis protein | VFG1300 | Protein | 2e-133 | 59 |
| cpsD | YP_003426273.1 | capsular polysaccharide biosynthesis protein | VFG0029 | Protein | 1e-75 | 44 |
