Gene Information

Name : smpB (BpOF4_05245)
Accession : YP_003426003.1
Strain : Bacillus pseudofirmus OF4
Genome accession: NC_013791
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 3302126 - 3302593 bp
Length : 468 bp
Strand : -
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGGCTGGAACAGAAGGAAAAGTAATTGCCCAAAATAAAAAAGCAAGACATGATTATTTCATTGAAGAAACATATGAAGC
AGGTATGGTACTGCAGGGAACTGAGATTAAATCGATGCGTGCCGGCCGTATGAATTTAAAGGACTCGTTTGCGCGGATTA
AAAACGGGGAAGTATACCTTCATAACGCTCATATCAGCGAGTATGAACAAGGAAACCGTTACAACCATGAACCAGAACGT
GCCCGCAAGCTGCTGCTTCACAAAAAGCAAATCAATCAGTTAATTGGTTTAACCAAGCAACAAGGTTACTCACTTGTTCC
TTTAAAGGTCTATATTAAAAACGGCTATGCCAAGATTTTAATCGGCCTTGCTAAAGGTAAGAAGAACTTTGATAAACGTG
AAACGCTTAAGCGTAAGGATGCCAAACGTGAAGTAGAACGTGCATTAAAGGACCGGATGAGAGGGTAA

Protein sequence :
MAGTEGKVIAQNKKARHDYFIEETYEAGMVLQGTEIKSMRAGRMNLKDSFARIKNGEVYLHNAHISEYEQGNRYNHEPER
ARKLLLHKKQINQLIGLTKQQGYSLVPLKVYIKNGYAKILIGLAKGKKNFDKRETLKRKDAKREVERALKDRMRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 6e-42 62
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-33 48
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 2e-27 43