Gene Information

Name : arsB (BpOF4_02680)
Accession : YP_003425495.1
Strain : Bacillus pseudofirmus OF4
Genome accession: NC_013791
Putative virulence/resistance : Resistance
Product : arsenic efflux pump
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 2802837 - 2804147 bp
Length : 1311 bp
Strand : -
Note : COG1055 Na+/H+ antiporter NhaD and related arsenite permeases

DNA sequence :
ATGACATCTGTGATATTAGCATCACTGATTTTCGTGTTCACGCTTGTTCTCGTCATCTGGCAGCCGAAAGGTTTATCTAT
CGGCTGGTCAGCAACAATTGGAGCGATCTTAGCTTTAATCGTTGGAGTGGTTGATTTTGGCGATGTCGTGACGGTAACAG
GAATTGTGTGGAATGCAACATTAACATTCGTTGCCATTATTATCATTTCATTAATATTAGACGAAATTGGTTTCTTTGAA
TGGTCAGCCTTACATATGGCCAGGTTTGCAAATGGTAATGGTTTAAAAATGTTCATATATGTCTCATTACTAGGAGCAGT
TGTTGCCGCATTGTTTGCAAATGACGGTGCTGCCTTAATTTTAACACCCATCGTATTAGCGATGGTCAGGGCATTGCGTT
TTAAAGAAGCGATGGTGCTTCCATTTATTATGGCAAGCGGATTTATCGCAGATACGACAAGTTTGCCGCTGCTCGTAAGT
AACCTCGTTAATATTGTATCTGCTGACTTTTTCGGAATTGGATTTGTTGAATATGCAACAAGAATGATTGTGCCGAACTT
CTTTGCACTTGGGGCAAGTATTCTTGTATTGTATCTATTCTTTAGAAAAGACATTCCACTAAAATATGATATGTCTCAAT
TAAAGGCGCCTGTTGAAGCAATTAAAGATCAGAAGCTGTTTAAGCTTTCATGGTATATCTTGGCTGTCCTTTTAATTGGG
TACTTCGTAAGTGAATTTATTCACTTGCCAGTCTCATTTGTAGCTATGCCGATCGCCATTATTTTCTATATTATTTTCCG
GATCATGAGTGCAGACAATCCAAGCTTAAGCTCAGCAGGCATAATTAAAGGTGCTCCGTGGGCGATCGTTGTTTTCTCCA
TCGGTGTGTATGTCGTTGTATACAGCTTACGAAATGTTGGATTAACAGATGTTCTAGCTGGATTTATCCAAATGACAGCT
GATCAAGGATTATTTGTTGGAACGATCTCGATGGGCTTTATCGCGGCCATTCTTTCATCGATTATGAATAATATGCCGAC
GGTGATGATCAATGCTTTGGCGATTGCAGACACGAATACAACAGGTATCATGCGTGAGGCATTAATCTATGCTAATGTGA
TCGGCTCTGATTTAGGTCCTAAAATTACGCCGATAGGCTCCCTTGCGACACTGCTATGGCTGCATGTCCTTTCGAAAAAA
GGGATGAAGATTTCATGGGGCTACTACTTTAAAGTCGGTATTATCTTAACTGTGCCAACACTATTTATTACCTTAGTCGG
ACTATACCTCTGGCTAATTATTATCTTGTAG

Protein sequence :
MTSVILASLIFVFTLVLVIWQPKGLSIGWSATIGAILALIVGVVDFGDVVTVTGIVWNATLTFVAIIIISLILDEIGFFE
WSALHMARFANGNGLKMFIYVSLLGAVVAALFANDGAALILTPIVLAMVRALRFKEAMVLPFIMASGFIADTTSLPLLVS
NLVNIVSADFFGIGFVEYATRMIVPNFFALGASILVLYLFFRKDIPLKYDMSQLKAPVEAIKDQKLFKLSWYILAVLLIG
YFVSEFIHLPVSFVAMPIAIIFYIIFRIMSADNPSLSSAGIIKGAPWAIVVFSIGVYVVVYSLRNVGLTDVLAGFIQMTA
DQGLFVGTISMGFIAAILSSIMNNMPTVMINALAIADTNTTGIMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSKK
GMKISWGYYFKVGIILTVPTLFITLVGLYLWLIIIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 6e-109 67
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 8e-112 67
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-111 66
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-99 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_003425495.1 arsenic efflux pump BAC0575 Protein 1e-112 67
arsB YP_003425495.1 arsenic efflux pump BAC0574 Protein 4e-112 67
arsB YP_003425495.1 arsenic efflux pump BAC0578 Protein 3e-99 60
arsB YP_003425495.1 arsenic efflux pump BAC0576 Protein 7e-100 60
arsB YP_003425495.1 arsenic efflux pump BAC0031 Protein 5e-96 58
arsB YP_003425495.1 arsenic efflux pump BAC0577 Protein 6e-98 58