Gene Information

Name : xerC (BpOF4_00230)
Accession : YP_003425007.1
Strain : Bacillus pseudofirmus OF4
Genome accession: NC_013791
Putative virulence/resistance : Unknown
Product : integrase/recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2325521 - 2326486 bp
Length : 966 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGGATCAATCAAATGAAGATTCGATGATGAAGGATTCAATGATAAAGGACTCGATTACCAACAATACGAAAACAAACGA
TTCTATACAAATGTTCGTACGCTACATGCAAGTTGAAAAAAATTATTCCCTACATACTGTTAAAAGCTATCTTAGTGATA
TAGAGGATTTTTGTCACTTCATGAAAGAGCATAACTGTGCTGCTTTTTCTGATGTGACTTATCTTTTTGTGCGCTCATAT
CTGACGTTTCTTTATGATAAAGCGTATGCTAGAAATTCAGTGGCAAGAAAGATCTCTTCTATGCGCAGTTTATTTCACTT
TCTTATGAGAGAAGAAGAACTTACCCGCAATGTCTTTGCAGAAACTCATCTTCCAAAACAGGCTTCAAAACTTCCAAGCT
TTTTGTATGAAGAAGAAATGGATGAGTTATTTAAAGCGTTTGAAGGAAATACACCTCTTGATAAAAGAGACCGAGCAATC
CTCGAACTTTTATATGCAACCGGAATGCGCGTAGGTGAATGCAGTCAATTAGATGTAGCGGATATAGATCTTAGGATTGG
CACTGCCTTTGTCAAAGGTAAAGGCAATAAAGAGCGCTATGTACCGATTGGTTCGTTTGCATGCGATGCATTACATGAAT
ATATTGAGGATGCTAGAGTAAACTTACTTAAAAAAGGTAATAGTGAGACTAAACGTCTTTTTCTGAATTATCGCGGAGGT
CCGTTAACTGACCGAAGTATACGGAGGATGTTAGCTAAAAGAGTGGAAGAGGCATCAATGCAAAAGCATATCCGACCTCA
TGATTTGAGGCACTCATTTGCAACTCATCTTCTAAATAATGGAGCGGACCTTAGAGTGGTTCAAGAATTACTAGGTCATG
AACATCTTTCTACGACTCAAGTGTACACTCATGTAACAAAAGACCGGCTTCGGGAAGTGTATAAAAATCATCATCCTCGT
GCGTGA

Protein sequence :
MDQSNEDSMMKDSMIKDSITNNTKTNDSIQMFVRYMQVEKNYSLHTVKSYLSDIEDFCHFMKEHNCAAFSDVTYLFVRSY
LTFLYDKAYARNSVARKISSMRSLFHFLMREEELTRNVFAETHLPKQASKLPSFLYEEEMDELFKAFEGNTPLDKRDRAI
LELLYATGMRVGECSQLDVADIDLRIGTAFVKGKGNKERYVPIGSFACDALHEYIEDARVNLLKKGNSETKRLFLNYRGG
PLTDRSIRRMLAKRVEEASMQKHIRPHDLRHSFATHLLNNGADLRVVQELLGHEHLSTTQVYTHVTKDRLREVYKNHHPR
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-39 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-39 41