Gene Information

Name : UCYN_09060 (UCYN_09060)
Accession : YP_003421971.1
Strain : Cyanobacterium sp. UCYN-A
Genome accession: NC_013771
Putative virulence/resistance : Virulence
Product : ATPase with chaperone activity, ATP-binding subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1038397 - 1040874 bp
Length : 2478 bp
Strand : -
Note : PFAM: ATPase family associated with various cellular activities (AAA); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA)

DNA sequence :
ATGTTTGAACGCTTTACAGAGAAAGCTATTAAGGTAATTATGCTTGCCCAGGAAGAGGCTCGTCGTCTTGGGCATAACTT
TGTCGGGACAGAACAAATTCTTCTAGGGTTAATCGGCGAAGGAACTGGAGTCGCAGCCAAAGTTCTTAAATCTATGGGAG
TTAATCTTAAAGATGCTCGTATTGAAGTTGAGAAAATTATTGGACGTGGTTCAGGTTTCGTCGCTGTTGAAATTCCTTTT
ACCCCAAGAGCAAAAAGAGTTCTGGAACTTTCCTTAGAGGAAGCCAGGCAATTGGGACACAACTACATTGGAACAGAGCA
TCTTTTATTAGGATTAATCAGAGAAGGAGAGGGAGTCGCAGCACGAGTCCTTGAAAATCTCGGTGTAGATCTCTCTAAAG
TAAGAACCCAAGTTATTCGTCAACTGGGAGAGACTGCAGAAGTTGCTGCAGGAGGTGTAGCACCAGGTAGAACTAAAACT
CCTACTCTTGATGAATTCGGTTCTAATTTGACTCAGTTAGCTACAGATGGGCAACTTGATCCAGTTGTAGGTAGACAAAA
AGAAATTGAGCGAGTAATTCAAATTCTTGGGCGTCGTACTAAAAACAATCCAGTTCTTATAGGAGAACCAGGTGTCGGTA
AAACAGCAATTGCCGAGGGACTTGCTCAACGTATTGCTGACCAAGATATTCCTGACATCCTTGAAGATAAGAAAGTTGTA
ACTCTTGATATAGGTTTATTAGTAGCAGGAACCAAGTATCGTGGAGAGTTTGAAGAACGTCTTAAAAAAATCATGGAAGA
GATTCGTCAAACAGAGAATATAATCTTAGTTATTGATGAAGTTCATACTCTTATTGGCGCTGGTGCTGCCGAAGGGGCAA
TTGATGCGGCTAATATCTTAAAACCAGCTTTGGCAAGAGGAGAACTCCAATGTATCGGAGCGACTACTCTTGACGAATAT
CGTAAACATATTGAAAAAGATGCTGCTTTAGAAAGACGTTTTCAGCCAGTGATGGTTGGAGAGCCAACTGTAGAAGAAAC
TGTTCAAATTCTCTATGGCTTAAGAGAACGTTATGAACAACATCATAAGCTTAAAATCTTAGATGAGGCTCTAGAAGCCG
CTGCTAAACTATCAGATCGTTATATTTCTGATCGTTTTCTTCCGGATAAAGCTATTGATCTCATAGATGAAGCAGGTTCT
AGAGTACGCTTAATAAACTCTCAGCTTCCTCCTGAGGCTAAAGAATTAGACAAAGAATTACGCACAATTTTAAAACAGAA
AGACGATGCGGTTCGCTCGCAAGATTTTAATCATGCAGGACAGCTACGAGATCAAGAAATGGAGATCAAATCGAAGATTC
GTTCAATTTCTTCCACTAAAAAAGGAGAAGGAGAAAACGATGAACCTTTTGTAGATTCAGAAGAAATAGCTCATATTGTT
GCTTCCTGGACAGGAGTGCCTGTAAACAAACTTACAGAAACCGAGTCTGAAAAACTTTTAAACATGGAAACAACCTTGCA
TCAAAGACTTATTGGTCAAGAAGATGCTGTGAAGGCTGTTTCAAGAGCTATACGTCGTGCGAGAGTAGGACTTAAAAACC
CTAATCGTCCTATTGCTAGTTTTATCTTTTCTGGCCCTACAGGTGTAGGGAAAACGGAGCTTACTAAAGCGTTAGCAGCT
TATTTCTTCGGCTCGGAAGATGCAATGGTCCGTCTAGACATGTCTGAATATATGGAGCGTCATACTGTATCTAAGTTAAT
TGGATCTCCACCTGGATATGTTGGTTACAATGAAGGAGGTCAATTAACAGAAGCAGTGCGCCGCCGTCCTTACACTGTAA
TTCTGTTCGATGAAATTGAAAAAGCGCATCCAGACATTTTCAATATGTTATTACAAATATTGGAAGATGGTCGTTTAACT
GATGCAAAAGGACGTACAGTAGACTTCAAAAATACTTTATTAATCATGACTTCTAATATAGGGTCTAAAGTAATTGAGAA
AGGTGGCGGCGGACTAGGTTTTGAATTTGAAAATAATCAAGCAGATGCACAGTATAACAGGATTCGTTCTTTAGTTAATG
AAGAGCTAAAAGAATATTTCCGTCCTGAGTTTCTGAATAGACTTGACGAAATTATTGTTTTCCGTCAACTAAACAAAGAA
GAAGTTAAAGAAATTTCTGAAATTCTTTTGAAGGAAGTATTTGCTCGGTTGACAGAAAAAGAAATTACACTTCAGGTTAC
TGATAAATTCAAAGAACGCTTAGTTGAAGAAGGTTACAATCCTTCTTATGGGGCAAGACCACTACGTCGTGCTATTATGC
GTCTCCTTGAAGACATCTTGGCCGAAGAAATTCTTTCAGGTAAGGTTAGGGAGGGAGATATTGCAGAAGTAGATATTGAT
GAACAAGGACAGGTTAAAATTATTGTCGCAGAGGATAAACAACCTCATTCAATTTCAACTTCAACATCTGATTCTTAA

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRQLGETAEVAAGGVAPGRTKT
PTLDEFGSNLTQLATDGQLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIADQDIPDILEDKKVV
TLDIGLLVAGTKYRGEFEERLKKIMEEIRQTENIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY
RKHIEKDAALERRFQPVMVGEPTVEETVQILYGLRERYEQHHKLKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGS
RVRLINSQLPPEAKELDKELRTILKQKDDAVRSQDFNHAGQLRDQEMEIKSKIRSISSTKKGEGENDEPFVDSEEIAHIV
ASWTGVPVNKLTETESEKLLNMETTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAA
YFFGSEDAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVILFDEIEKAHPDIFNMLLQILEDGRLT
DAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFENNQADAQYNRIRSLVNEELKEYFRPEFLNRLDEIIVFRQLNKE
EVKEISEILLKEVFARLTEKEITLQVTDKFKERLVEEGYNPSYGARPLRRAIMRLLEDILAEEILSGKVREGDIAEVDID
EQGQVKIIVAEDKQPHSISTSTSDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UCYN_09060 YP_003421971.1 ATPase with chaperone activity, ATP-binding subunit VFG0079 Protein 0.0 60
UCYN_09060 YP_003421971.1 ATPase with chaperone activity, ATP-binding subunit VFG0080 Protein 4e-152 53