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Name : UCYN_07930 (UCYN_07930) Accession : YP_003421867.1 Strain : Cyanobacterium sp. UCYN-A Genome accession: NC_013771 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 901946 - 903229 bp Length : 1284 bp Strand : + Note : PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase DNA sequence : GTGTTAGATCTTAAAAAAATACGAGAAAATCCAGAAATCATACAAACACTGCTTAATAGTCGGGAGCCTTACCCGAAACA TGATCTTAAACCTATTTTAAATTATGACAGACAACAAAGAGAATTAGAAGTTCTTCGCACTGAACTACAAACAAAAAGTA ATGAGATTAGTAAATTAATTGGACAAAAAATAAAGAATGGACTGGATCCAACAGTAAAAGAAATTAGTAATCTTAGAGAA CAAGGAAATAGCCTAAAGAAAAAGCTTTTTGAGCTAGAGCCAGAAGAAAAAAAGATAAAAGAAAAACTCGAAAATTTACT ATTACAACTTCCTAACTTACCTGTTTCTTCTGCACCTATTGGAAAAGATGAAACAGAAAATATAGAGGTAAAATCCTGGG GAGAAGAATATTTACCCAAAATAGAAGTATTACCTCATTGGGAAATCGCTGAAAAACTTGGTATTTTAGAGGTAGAAAAG GCTGTTAAAATAGCACGGAGTCGTTTTGTAGCACTATTTGGAGTAGGAGCTGCTTTAGAAAGAGCTCTAATCAGTTATAT GCTTGATCAGCATATAGCTTCAGGATATATAGAAGTTATGCCTCCTATCTTAGTTAATAGTAATGCTTTAAGGGGAACAG GACAGTTGCCTAAATTTGCTGAAGAGAGTTTTTTTTGTCGTGAAGACGATTTATGGTTATCGCCTACCGCAGAAGTTCCT GTGATGAACCTCTACAGTAATGAAATTTTAGAAAAAGAAGCATTATCTATCAGACACTGTGCTTTTACTCCTTGTTTCCG TAGAGAAGCAGGAAGTTATGGAAAAGATACAAGAGGTCTTATCAGGCTTCATCAATTTAATAAAGTTGAACTAGTAAAAA TTGTTCATCCTCAAGACTCAGAGATAGAACATCAACGGCTAGTAGAAAATGTTGAATCTATTTTACAAAATTTAAAACTT CCGTATCGAATCTTAGAGTTATGTACAGGAGATTTAGGCTTCGGTGCGGCAAAATGTTATGATTTGGAGGTGTGGCTTCC TTCTTCTAATTCTTATAGAGAAATTTCAAGCTGCTCTAACTGTTGGGACTTTCAAGCAAGACGAGCGAACATACGCTTTA GGGAAAAAGGACAAAAAGGTACTAAATATGTACATTCCCTAAATGGTTCAGGACTAGCTGTAGGAAGGACTATGGCAGCT ATTCTGGAGAATTACCAACAAGCTGATGGAACAATTAAGGTGCCTGAAGTTTTGCAACCATATCTAAAGCAAGATACTCT ATAA Protein sequence : MLDLKKIRENPEIIQTLLNSREPYPKHDLKPILNYDRQQRELEVLRTELQTKSNEISKLIGQKIKNGLDPTVKEISNLRE QGNSLKKKLFELEPEEKKIKEKLENLLLQLPNLPVSSAPIGKDETENIEVKSWGEEYLPKIEVLPHWEIAEKLGILEVEK AVKIARSRFVALFGVGAALERALISYMLDQHIASGYIEVMPPILVNSNALRGTGQLPKFAEESFFCREDDLWLSPTAEVP VMNLYSNEILEKEALSIRHCAFTPCFRREAGSYGKDTRGLIRLHQFNKVELVKIVHPQDSEIEHQRLVENVESILQNLKL PYRILELCTGDLGFGAAKCYDLEVWLPSSNSYREISSCSNCWDFQARRANIRFREKGQKGTKYVHSLNGSGLAVGRTMAA ILENYQQADGTIKVPEVLQPYLKQDTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-81 | 45 |
