Gene Information

Name : UCYN_04490 (UCYN_04490)
Accession : YP_003421540.1
Strain : Cyanobacterium sp. UCYN-A
Genome accession: NC_013771
Putative virulence/resistance : Unknown
Product : primary replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 494157 - 495491 bp
Length : 1335 bp
Strand : -
Note : PFAM: DnaB-like helicase C terminal domain; DnaB-like helicase N terminal domain; TIGRFAM: replicative DNA helicase

DNA sequence :
ATGACTAATAACAATATTCCTCCTCAAAATATCGAAGCTGAAGAGTCTATTCTAGGCGGAATCTTACTCGATCCTGAAGC
TATGGGAAGAATTGTAGACCTAATAACTCCAGAATCGTTTTATGTAAGAGCACATCAAGAAATTTATGAAGCTGCCTTAA
AGTTACATAGTCAAGGAAAGCCTACTGACTTTTTAACAGTTAAAAGTGTTTTAGAAGATCATTTATTATTAGAGAAAATA
GGTGGAATTGATAAATTAACTCAATTGCTTGATAGAACAGTCTCTGCCGTTAACATTGATCGTTATGCGGCATTAATTAT
GGATAAGTACTTACGTCGTCAACTAATTAGTTCTGGCCATGAGATTGTCTCTTTAGGATTTGAAACGACTAGAGATTTAG
AAATAGTTTTAGATGAATCAGAAAAAAAAATATTTGGTTTAACTCAAAAAAGGCCACAAGGAGGACTAGTTCCAATTTCG
GATACAATTATCCAAACTTTTAATGAATTAGAAAAATTACATAATCAGACGGCTCTTCCTGGAATAGAGACAGGATTTTA
TGACTTAGATGCTATGACAGGGGGGTTGCAACGTTCAGATCTTATTATCATTGCCGGAAGACCATCAATGGGGAAAACTG
CTTTTGGATTAGGACTAGTAGCACATATTGCTAAAAATTTTAATTTACCAGTAGCAATATTTAGCCTAGAAATGTCAAAA
GAACAACTTTCTATGAGGTTATTAGCATCGGAAGCAGAAATTGAAAGTAATCGCTTGCGATCAGGAAGATTTGTACAAGA
TGACTACAGTACAATTAGTACTGCAATAGGTACTTTATCTAACCTACCAATTTATATTGACGATTCTGCAAATGTTACAG
TTATGCAGGTACGTTCTCAAGTACGTCGATTATTGGCAGAAAAAAAAGGAGACTTTGGATTAGTTCTAATTGACTATTTA
CAATTAATGGAAGGAGCAGAGAAAGATAATCGAGTTCAAGAATTATCAAAAATGACTCGCTCTTTAAAAGGATTAGCACG
TGAGATAAAAGCTCCTGTTATCGCGCTATCACAGTTAAGCAGGGGCGTTGAAGCCAGAAACAATAAGCGTCCCATGATGT
CAGATTTACGGGAAAGTGGCTCTATTGAACAAGATGCTGATTTAATTATGATGTTATACCGAGATGAGTATTATAATCCT
GAAACAATAGATAAAGGAGTTACTGAACTTATCTTAACGAAACATCGTAACGGCCCTACTGGAACTGTTAAATTACTTTT
CCAGGCAGAATTAACTAAATTTTTAAATATGCAAGCAAATTCTAATTACTTTTAA

Protein sequence :
MTNNNIPPQNIEAEESILGGILLDPEAMGRIVDLITPESFYVRAHQEIYEAALKLHSQGKPTDFLTVKSVLEDHLLLEKI
GGIDKLTQLLDRTVSAVNIDRYAALIMDKYLRRQLISSGHEIVSLGFETTRDLEIVLDESEKKIFGLTQKRPQGGLVPIS
DTIIQTFNELEKLHNQTALPGIETGFYDLDAMTGGLQRSDLIIIAGRPSMGKTAFGLGLVAHIAKNFNLPVAIFSLEMSK
EQLSMRLLASEAEIESNRLRSGRFVQDDYSTISTAIGTLSNLPIYIDDSANVTVMQVRSQVRRLLAEKKGDFGLVLIDYL
QLMEGAEKDNRVQELSKMTRSLKGLAREIKAPVIALSQLSRGVEARNNKRPMMSDLRESGSIEQDADLIMMLYRDEYYNP
ETIDKGVTELILTKHRNGPTGTVKLLFQAELTKFLNMQANSNYF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 4e-72 41
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 4e-72 41