Gene Information

Name : UCYN_03990 (UCYN_03990)
Accession : YP_003421494.1
Strain : Cyanobacterium sp. UCYN-A
Genome accession: NC_013771
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0460
EC number : -
Position : 439714 - 441003 bp
Length : 1290 bp
Strand : +
Note : PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; ACT domain

DNA sequence :
GTGACTATCAAAATTGGTTTGTTAGGTTTGGGAGTAGTTGGAACAGGAGCTGCAAAAATTATACTTGATCCTTCAGGTCG
TAATTCTCTTGTAAAAGATATTTCCATAGTAAAAATAGGAGTAAAATCAGCCAATAAACCTCGTCAGATAGATTTACCCC
CAAATGTAATTGAAACTGATTTAGAAAATATAGTTAACAATCCTGATATAGATATTGTGGTTGAATTGTTAGGTGGTTTA
GAGCCAGCTAGAACACTTATCTTGAAAGCTATTGCTAACAAAAAACATATTGTTACTGCAAATAAGGCAGTCATGGCACT
TTATGGAGATGAAATCTACAAAAAAGCTTGTATAGCTGGTGTCTATGTTTTATTAGAAGCTGCCGTTGGAGGAGGTATTC
CTATCGTAAAAGCTTTAAAACAATCTTTAAGTGCTAACCGTATTGAAAGTATTGTCGGCATAGTCAATGGTACTACAAAT
TATATTTTGACAAAAATGGCTTCTGAAGGAACTGACTTTGAAAAAGTTTTGATGGAAGCACAAAAATTAGGGTATGCAGA
GGCTGATCCAAGTGCTGATATTGATGGATTGGATGCAGCTGATAAAATTACTATCCTGGCTTCATTAGGATTTGGAATGC
AAATAAATAGACATGACATCTATTATGAAGGTATTCGTGGAATTAACTCTATAGATATAAAATATGCTAAACAATTAGGA
TTCGTAATAAAACTATTAGCAATTGCAAAAAAAGTAACAAACAATACTTCAGAAAAATTACAATTAACAGTACATCCTAC
TTTAGTACCAGAAGAACATCCCTTAGCTCATGTAGATGGAGTATATAATGCAGTTCTAGTGGAAGGAGACCCTTTGGGAG
AAGTCATGTTTTTAGGGCAAGGTGCTGGTTCTGGACCTACAGCAAGTGCAGTAGTTTCTGATATCGTAAATATCGTAGAT
GCTCTCAAAAACAATAGGACTGTCAGTTCTTCATTAGATTATATTAACAGTGATTTATATAAGATAACTCCTATAGAGTC
GGTTAAAACTCGCTTTTATGTTCGTTTTCTTAGCAAAGATTTACCTGGCGTTATAGGACATCTAGGAACAATATTTGGTG
AGTATAGTGTTAGTCTAAAGTCAGTTGTACAAATCGGTTTGCAAAAAAAATTAGCTGAAATTGTTATTATTACTTATCAT
GTTGATGAAGGCTCTTTGCGTGCTGCTCTTGATAAAATTAGTACTTTAGATGCTATTGACTCTATTCCTAGTATCTTAAG
AGTTTTATAA

Protein sequence :
MTIKIGLLGLGVVGTGAAKIILDPSGRNSLVKDISIVKIGVKSANKPRQIDLPPNVIETDLENIVNNPDIDIVVELLGGL
EPARTLILKAIANKKHIVTANKAVMALYGDEIYKKACIAGVYVLLEAAVGGGIPIVKALKQSLSANRIESIVGIVNGTTN
YILTKMASEGTDFEKVLMEAQKLGYAEADPSADIDGLDAADKITILASLGFGMQINRHDIYYEGIRGINSIDIKYAKQLG
FVIKLLAIAKKVTNNTSEKLQLTVHPTLVPEEHPLAHVDGVYNAVLVEGDPLGEVMFLGQGAGSGPTASAVVSDIVNIVD
ALKNNRTVSSSLDYINSDLYKITPIESVKTRFYVRFLSKDLPGVIGHLGTIFGEYSVSLKSVVQIGLQKKLAEIVIITYH
VDEGSLRAALDKISTLDAIDSIPSILRVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 5e-65 43
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 5e-65 43