Gene Information

Name : UCYN_12450 (UCYN_12450)
Accession : YP_003422292.1
Strain : Cyanobacterium sp. UCYN-A
Genome accession: NC_013771
Putative virulence/resistance : Virulence
Product : ATPase family protein associated with various cellular activities (AAA)
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1402975 - 1405578 bp
Length : 2604 bp
Strand : -
Note : PFAM: ATPase family associated with various cellular activities (AAA); Clp amino terminal domain

DNA sequence :
ATGCAACCTACTGATCCTAACAAGTTTACATTAAAAGTATGGGAAGCAATCGTTGAAACTCCAAAAATTGCAAAAGAAAA
CAAACATCAACAAATTGAAACTGAGCATTTGATGAAATTTCTTATAAAGAAAGATGAATTATCTATAAGAGTATTTAATA
AGGCAAATGTTGATATAAACAAAGTACAAGATATTACTGAAAAATTTATTTCTAATCAACCGAAAGTATCCAATTCTATA
GAATCTGTTTATCTAGGATACAGTTTAGACAAACTTTTTGATAAAAGTGAAAACTTTCGACAAGAATTTCAAGATAATTA
TATTTCTATAGAACACATACTTTTGGCATATATTTACGATAATCGTTTCGGAATAGACTTATTTAAGCAAATCAACCTAT
CCAAAGAACATTTAGAAAAAGTTATAAAAGAAATTAGAGGGGAAAAAAAAGTGATCGATCAAAATCCAGAAGTTAATTAT
GAAGCATTAACAAAATATGGAAGAGATTTAACAAAGTTAGCTGAGGAAGGAAAACTCGATCCAGTTATTGGAAGAGACGA
TGAAATTCGTCGTACTATCCAAATTTTGTCTCGCAGGACTAAAAATAATCCTGTTTTAATTGGAGAACCTGGAGTAGGAA
AAACAGCTATCGTTGAGGGTTTGGCTCAAAGAATAATTAATAGAGATGTCCCTGAATCTTTACGAGATAGGAAACTTATT
GTTTTAGACATGGGGTCTTTAATTGCAGGTGCAAAATATCGAGGAGAATTTGAAGAACGATTAAAAGCAGTCTTAAAAGA
AGTTATCGATTCTCAAGGTAGCATTATTTTGTTTATTGATGAAATACATACCGTAGTTGGAGCAGGCGCTACTCAGGGAG
CGATGGATGCTGGAAATCTACTTAAACCTATGCTAGCAAGAGGCGAACTCAGATGTATCGGAGCAACGACACTTAATGAA
TATCGAAAATATATTGAAAAAGATGCTGCTTTAGAACGACGTTTTCAATCAGTCATAATAGACGAGCCTAACGTAATTGA
TACAATTTCTATTTTACGTGGATTAAAAGAACGCTATGAAGTTCATCATGGAGTAAAGATAGCAGATACAGCATTAGTAG
CTGCAGCAGTATTGTCTGATCGCTATATTAGTGATCGTTTTTTGCCCGATAAGGCTATCGATCTAATAGATGAATCTGCT
GCTAAACTTAAAATAGAAATTACTTCTAAGCCAGAAAAGTTAGATGAAATTGATCGTAAAATTCTTCAACTAGAGATGGA
ACGCCTGTCTTTAAATAAGGAGGAAGATCATCTGTCTTGCGAAAGATTAAAAATTTTAGAGAAAGAGATTTCTGATTTAA
AGCAAGAACAATTTGATCTTAATTCACGATGGCAAACAGAAAAGACACTAATCGATCAAATACTAAAATTAAAAAAAACT
ATTGATCAAGTTAACTTAGAGATTCAACAATCTGAAAGGGATTACGATCTCAACAAAGCTGCTGAGTTAAGATATGGCAA
ATTGTCAACGTTACAGAAGCAAATAAAAGAATTAGAAGATAAAACTGTAAACAATCAAAATAAAATTTTACTTAGGGAAG
AAGTAGTACCATCAGATATAGCTGAAATCATATCTCGATGGACAGGAATTCCTCTTAACAAACTAGTACAATCGGAAAAA
GAAAAATTATTAAATTTAGAAGATGACCTTCATGAAAAGATAGTGGGGCAAGAAGAAGCTGTAACTGCTGTTGCAGACTC
TATTCAAAGATCAAGAGCTGGCCTTGCAGACCCAAAACGCCCTATTGCTAGTTTTCTTTTTCTTGGACCTACAGGAGTTG
GAAAAACTGAATTGGCAAAAGCACTTGCAAAAAGTTTATTCGATACTGAGGAATCGATAGTACGTATTGATATGTCTGAA
TATATGGAGAGGCATACTATATCTCGCTTGATTGGAGCACCCCCAGGGTATGTTGGTTACGATGAGGGAGGACAATTAAG
TGAAGCTATTCGTCGTCATCCATATGCTGTAATTCTTTTTGATGAGATAGAAAAAGCTCATGCTGATATTTTTAATATTA
TGTTACAAATTCTTGATGATGGTAGATTAACCGATTCTCAAGGACGTACCGTAAACTTTAAAAATACTATTATTATTATG
ACTAGCAATATAGGTTCACAATATATATTAGATGTTGTGGATGATGATTCTCGTTATAGTGAAATGTACTCGCGTGTTGT
CAAAACTGTACAAAATAATTTTCGTCCTGAATTCCTTAATCGCATTGATGAAATGATAATTTTTCATGGATTACAAAGGT
CTCAATTAAGAGACATTGTTAAGCTGCAAACTCAACTGTTAAGTAATCGTCTAGAAGAACAAAATATATATATTCAATTA
TCAGATTCTGCCTTAGACTTTATCGTTAATGTTGGCTATGATCCTGTTTATGGAGCTAGACCTCTAAAAAGAGCGATTCA
AAAATATTTGGAAACCCCTATTGCTAAACTACTTCTTAAAGGGGAATTCGTAGGAGAAGATACAATCTTTGTAGATCTTA
AAGACGAAATTTTAATTTTTACAAAAATCGCTATTGAAAATTGA

Protein sequence :
MQPTDPNKFTLKVWEAIVETPKIAKENKHQQIETEHLMKFLIKKDELSIRVFNKANVDINKVQDITEKFISNQPKVSNSI
ESVYLGYSLDKLFDKSENFRQEFQDNYISIEHILLAYIYDNRFGIDLFKQINLSKEHLEKVIKEIRGEKKVIDQNPEVNY
EALTKYGRDLTKLAEEGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLRDRKLI
VLDMGSLIAGAKYRGEFEERLKAVLKEVIDSQGSIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLNE
YRKYIEKDAALERRFQSVIIDEPNVIDTISILRGLKERYEVHHGVKIADTALVAAAVLSDRYISDRFLPDKAIDLIDESA
AKLKIEITSKPEKLDEIDRKILQLEMERLSLNKEEDHLSCERLKILEKEISDLKQEQFDLNSRWQTEKTLIDQILKLKKT
IDQVNLEIQQSERDYDLNKAAELRYGKLSTLQKQIKELEDKTVNNQNKILLREEVVPSDIAEIISRWTGIPLNKLVQSEK
EKLLNLEDDLHEKIVGQEEAVTAVADSIQRSRAGLADPKRPIASFLFLGPTGVGKTELAKALAKSLFDTEESIVRIDMSE
YMERHTISRLIGAPPGYVGYDEGGQLSEAIRRHPYAVILFDEIEKAHADIFNIMLQILDDGRLTDSQGRTVNFKNTIIIM
TSNIGSQYILDVVDDDSRYSEMYSRVVKTVQNNFRPEFLNRIDEMIIFHGLQRSQLRDIVKLQTQLLSNRLEEQNIYIQL
SDSALDFIVNVGYDPVYGARPLKRAIQKYLETPIAKLLLKGEFVGEDTIFVDLKDEILIFTKIAIEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-103 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 7e-104 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 5e-104 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UCYN_12450 YP_003422292.1 ATPase family protein associated with various cellular activities (AAA) VFG2076 Protein 3e-112 42
UCYN_12450 YP_003422292.1 ATPase family protein associated with various cellular activities (AAA) VFG2084 Protein 5e-108 41