|
Name : LM5923_0959 (LM5923_0959) Accession : YP_003416165.1 Strain : Listeria monocytogenes 08-5923 Genome accession: NC_013768 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0842 EC number : - Position : 964154 - 965269 bp Length : 1116 bp Strand : + Note : - DNA sequence : ATGAGAATACTTGCAATCGTCAAACGCATCATTAACCAATTTCGCCGCGACAAACGTACGCTTGCCCTAATGTTTCTTGC GCCACTGTTACTTATTACGCTACTCACTTATTTATTCGAAGGTGACACAGTGAAGCCAGTTGTTGGTGTAAGCGGACTTT CTGATTCCATGGTAAAAGAACTGAAAGCAAACGATTTAACCATCAAAACCTATTCAGAAAATACCGATGTAACCGCTAAA ATAAAAGATGCCAACCTTGACGCTTTTTTCAAACAAAACGGTGAAAAACTCGAAGTCACCTATGAAAATAGTGAACCAAG CTTGAGTAAAGAAATCGGATTAAAATTACAAAAAGCATTGATGACCGAGCAACAAGCACAAGCAAAGAACCAAGCAAAGG CAACAGGAGAAGCTTTAGCTAAAGCTGGAATTGATCCAAACAGTATTCCAACACTTACCGCCAGTCCGGAGAAACTTACA CTCTCAACAGATTACGTTTACGGCGATAAAGATACTAGCTTTTTCGACACAATTAGCCCGATTTTCATTGGCTTTTTCGT ATTCTTCTTCGTATTTCTGATTGCCGGTATTTCTTTCTTGAGAGAACGAACAACAGGTACGCTTGAACGACTCATGGCAA CCCCAATTAAACGTATCGAACTTGAATTAGGGTATTTAATAGGTTTTGGTATTTTTGCGTTACTACAGTCTATCTTAGTC GCAGTTTTCTCCATCCAAGTGCTTGGCATGATGCAAAACGGCTCCTTATTCTATGTATTACTAATTACATTAACACTCGG CATGGTTTCTCTAGCGCTAGGAATTTTACTTTCTACTTTTGCAAATAATGAATTTCAAATCGTTCAATTTATTCCTATCG TTATCGTGCCACAAGTGTTATTTTGTGGGATTTTCCCGCTCGATGGGATGGCAGATTGGCTCGTGTGGATTGCCCACATA ATGCCGCTTTACTACGGCGCAAATGCACTAACATCCATCATGGTAAAAGGAGAAGGATTCGCTTCGTTTGCAACTGATTT CTACATTTTACTAGGATTTGTGCTCGTATTTGTTATATTAAATATTTTTGCTTTGAAAAAATACCGCAAAGTTTAA Protein sequence : MRILAIVKRIINQFRRDKRTLALMFLAPLLLITLLTYLFEGDTVKPVVGVSGLSDSMVKELKANDLTIKTYSENTDVTAK IKDANLDAFFKQNGEKLEVTYENSEPSLSKEIGLKLQKALMTEQQAQAKNQAKATGEALAKAGIDPNSIPTLTASPEKLT LSTDYVYGDKDTSFFDTISPIFIGFFVFFFVFLIAGISFLRERTTGTLERLMATPIKRIELELGYLIGFGIFALLQSILV AVFSIQVLGMMQNGSLFYVLLITLTLGMVSLALGILLSTFANNEFQIVQFIPIVIVPQVLFCGIFPLDGMADWLVWIAHI MPLYYGANALTSIMVKGEGFASFATDFYILLGFVLVFVILNIFALKKYRKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0095 | NP_763650.1 | hypothetical protein | Not tested | SCCpbp4 | Protein | 1e-44 | 44 |
| SH0082 | YP_251997.1 | hypothetical protein | Not tested | SCCmec | Protein | 5e-44 | 44 |
| SH2614 | YP_254529.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 6e-45 | 43 |
