|
Name : LM5923_0376 (LM5923_0376) Accession : YP_003415584.1 Strain : Listeria monocytogenes 08-5923 Genome accession: NC_013768 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 386975 - 388972 bp Length : 1998 bp Strand : - Note : - DNA sequence : ATGAGCAGAATTGATGAACAAATGGTTAACTCGATTCGTGTATTATCAATGGATATGATTGAAAAAGCGAACTCCGGACA TCCCGGTTTACCGATGGGAGCCGCACCAATGGCTTTCTCACTCTGGAAAAATCATTTAAAATTCAATCCAGAACATCCAA CTTGGTTTAACCGCGATCGCTTCGTTCTGTCAGCTGGTCACGGTTCGGCAATGCTTTATAGTTTGCTCCATCTATTTGGT TATGATTTACCAATGAGCGAGCTGAAAAACTTCCGCCAAACTGGCAGTAAAACGCCCGGTCATCCTGAATTTGGTCATAC GGTTGGTGTGGATGCAACTACTGGTCCGCTTGGTCAAGGTTTCGCAATGGGAGTTGGGATGGCAATGGCCGAGGCTCACC TTGGTGCCAAATTTAACCAACCTGAATTCCCTGTTGTCGATCATAACACCTACGTGCTATGCGGAGACGGCTGCTTGATG GAAGGTATTTCCTATGAAGCCGCATCCCTTGCCGGCCATTTAAAACTGGGAAAATTAGTTGTTTTATATGATTCGAATGA TATCTCACTGGATGGTGATTTAAACGAGTCATTTTCAGAAGACATCGAACTCAGATTCCGAGCTGCTGGTTGGCAAACGC TACGTGTGGACGACGGAAACGACTTAGATGCGCTTGATGCAGCAATCCATCTTGCAAAAACGGAAAAATCCCGCCCAACT TTGATTGAAGTGAAGACAGTGATTGGTTATGGTAGCCCTGGAAAAGCCGGAAAATCGGCGGCTCACGGATCCCCACTTGG TGAAAAGGAACTCAAGCTTGCAAAAGAAGCTTACGACTGGCAAATGCCACCTTTTGAATTACCGAAAACCGTCGAAAACC AAAAAGAATTTTATCATTCCAAAGGTCGCGCGAGTGAAAGCAGCTGGCTCCGGACATTCAATGCTTACAAACAAAAATAT CCAGCACTAGCAGAAAGCTTGCAACACCTAATGGACGATAATTTGACAGCTGATTGGGACGCAGAACTTCCTGTCTTCGA TGAAAATGCAGATAAACCAGTTGCGACTCGTGAAGTATCGGGGATTATTCTTCAAGAATTGGAGAAAAAACTGCCTAACT TATTTGGTGGCGCAGCTGATTTAGCTTCCTCCAATAAAACCCATTTAAAAGCTAGCGAACGGTTCGCTCCAGGTAATTAC GCGGCCAAAAATATCTCGTTCGGCGTCCGCGAATTCGCGATGGGAGCAGCAGTCAACGGAATGACGCTTCATGGCGGAGT TCAAGCATTCGGCGCGACTTTCTTCGTTTTCTCGGATTATCTACGTTCCGCGATTCGTTCGGCAGCCTTAATGGGCATTC CATCCACCTTTATTATGACCCATGATTCCATCGCGGTTGGTGAAGACGGTCCAACACACGAACCAATCGAGCATCTCGCA TCCTTCCGCGCCATGCCGGGACTTCACGTAATCCGACCAGCTGACGGCAACGAAACCGTCGAAGCATACCGCTTTGCCTT TACTCAAAAAGAACAACCAACCATGCTAGTCCTCAGCCGCCAAAACCTGCCAATTTTACCAAACAGCGCAGCAAAAGCGA AAACCGGACTTGCAAAAGGTGCCTACATCTTAGCCGATTCCCCGCTGGACAAGCTAGATATCATCCTACTCGCTTCCGGA TCCGAAGTGCACCTAATGACAGCTGTCAGAGATAATCTCGCTAAAAAAGGCTTCGGCGCACGCGTAGTCAGCATGCCAAG CTTTGATTTATTCGACAAACAAAGCCCCGAATATAAAGAGTCTATTTTACCAAAAGCAGTGAAAAAACGCTTCGCTGCAG AAATGGGCGCATCATACGGCTGGCACAAATACCTCGGCGACACAGGCGAAATCCTCGCGATTGATTCATTCGGAATGTCT GGTCCAGGAGATGAGCTAGCAGAGCGATTTGGGTTTACTGTAGAGAACCTGACGGAGCTTGCGTTGAAACAGTTGTAG Protein sequence : MSRIDEQMVNSIRVLSMDMIEKANSGHPGLPMGAAPMAFSLWKNHLKFNPEHPTWFNRDRFVLSAGHGSAMLYSLLHLFG YDLPMSELKNFRQTGSKTPGHPEFGHTVGVDATTGPLGQGFAMGVGMAMAEAHLGAKFNQPEFPVVDHNTYVLCGDGCLM EGISYEAASLAGHLKLGKLVVLYDSNDISLDGDLNESFSEDIELRFRAAGWQTLRVDDGNDLDALDAAIHLAKTEKSRPT LIEVKTVIGYGSPGKAGKSAAHGSPLGEKELKLAKEAYDWQMPPFELPKTVENQKEFYHSKGRASESSWLRTFNAYKQKY PALAESLQHLMDDNLTADWDAELPVFDENADKPVATREVSGIILQELEKKLPNLFGGAADLASSNKTHLKASERFAPGNY AAKNISFGVREFAMGAAVNGMTLHGGVQAFGATFFVFSDYLRSAIRSAALMGIPSTFIMTHDSIAVGEDGPTHEPIEHLA SFRAMPGLHVIRPADGNETVEAYRFAFTQKEQPTMLVLSRQNLPILPNSAAKAKTGLAKGAYILADSPLDKLDIILLASG SEVHLMTAVRDNLAKKGFGARVVSMPSFDLFDKQSPEYKESILPKAVKKRFAAEMGASYGWHKYLGDTGEILAIDSFGMS GPGDELAERFGFTVENLTELALKQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-141 | 48 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-139 | 47 |
