Gene Information

Name : LM5923_2726 (LM5923_2726)
Accession : YP_003417929.1
Strain : Listeria monocytogenes 08-5923
Genome accession: NC_013768
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2739812 - 2740480 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
ATGACTTTAATGATGAAAAATATTACTAAAAATTATCAAGATGGCGAGCAAGTCATCGAAGTGTTGAAAAATGTATCTTT
AGAAGTGGCGCAAGGAGAATTCGTTGCAATCGTTGGACCTTCAGGCGCTGGGAAAAGTACATTTTTATCCATCGCAGGTG
CATTATTATCCCCAACAGAAGGAGAAATTGCTATAGGTGGAAAAGTGTTAAATGACCTCACAAGCAAAGACTTAACAAAA
GTGCGGCTCGACAAAGTAGGGTTCATTTTCCAAGGTGCGAACCTAATCCCGTACTTAAATGTCCGTGATCAGTTACTCGT
AATTGCGGAACTATCTGGTGATAAAGGGCGAGTAGCAAAAGAAAAAGCAGATGAATTACTTAAAGAATTAGGTTTAACTG
CTCGCGAAAACAATTATCCGGAAAGTTTATCGGGTGGTGAAAAACAACGTGTCGCCATTGCTAGAGCACTAATGAACGAC
CCCGATATTATTTTAGCGGACGAACCAACCGCAAGCTTAGATGCGAGCCGTGGTCACAAAGTAGTCCAAATGATTGCGGA
TGAAGTAAAACGAAAAAACAAAGCTGCCATCATGGTTACGCATGATGAACGAGTTTTAGACTTAGTTGACCGCGTAATTC
GGATTGAAGATGGCTATTTGAAGGATTAA

Protein sequence : 
MTLMMKNITKNYQDGEQVIEVLKNVSLEVAQGEFVAIVGPSGAGKSTFLSIAGALLSPTEGEIAIGGKVLNDLTSKDLTK
VRLDKVGFIFQGANLIPYLNVRDQLLVIAELSGDKGRVAKEKADELLKELGLTARENNYPESLSGGEKQRVAIARALMND
PDIILADEPTASLDASRGHKVVQMIADEVKRKNKAAIMVTHDERVLDLVDRVIRIEDGYLKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 7e-43 46
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 5e-49 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM5923_2726 YP_003417929.1 hypothetical protein NC_012469.1.7686878. Protein 4e-40 46
LM5923_2726 YP_003417929.1 hypothetical protein CP001581.1.gene798.p Protein 2e-37 43
LM5923_2726 YP_003417929.1 hypothetical protein CP001581.1.gene598.p Protein 5e-36 41