Gene Information

Name : LM5923_2521 (LM5923_2521)
Accession : YP_003417724.1
Strain : Listeria monocytogenes 08-5923
Genome accession: NC_013768
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2530806 - 2531486 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAACTCTACTATCTTTTGAGAAAGTATATAAAGATTACCCGTCTGGTCCTTCAATTATTCATGCACTGAAGGAAAC
CAATTTCGAAGCGAAAAAAGGCGAATTAATCGCGATTGTTGGTCCGAGTGGTTCTGGTAAAAGTACGCTCCTTTCTCTTG
CCGGAGCGCTATTAACACCTACTGGCGGAACAATTTCTATTAACGGCAAATCAGTCGGGAATCTATCTTCCAAAGAACAA
ACAGCGCTACGCTTAGAAGAAATCGGCTTTATTTTCCAAGCAGCTCATCTGGTTCCTTACTTACATGTAAAAGATCAAAT
TAGCTTTATTGGGAAAATGGCTGGGAAAAGTGCGGCGGAACTTGAAAAAGATACAGCGTCGCTTCTAAGCCAACTTGGAA
TTAGCGATCGCGCGAATTTCTATCCAAAAGATTTATCTGGCGGTCAAAAGCAACGTGTCGCTATTGCTCGCGCGCTTATT
AATCAACCCTCCGTTATTTTAGCCGATGAACCAACTGCGAGTCTTGATACTGAAAGAAGTCGTGAAGTTGTCGAGCTTAT
CCGTAATGAGGTTGTGCAAACGAGTCGAACAGCGATTATGGTAACACATGATGAGCGTATGCTAGATTTAGTCAACCATG
TGTATCGTATGGAAGACGGAATCCTTACCCAAGAAAGCTAA

Protein sequence : 
METLLSFEKVYKDYPSGPSIIHALKETNFEAKKGELIAIVGPSGSGKSTLLSLAGALLTPTGGTISINGKSVGNLSSKEQ
TALRLEEIGFIFQAAHLVPYLHVKDQISFIGKMAGKSAAELEKDTASLLSQLGISDRANFYPKDLSGGQKQRVAIARALI
NQPSVILADEPTASLDTERSREVVELIRNEVVQTSRTAIMVTHDERMLDLVNHVYRMEDGILTQES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-34 49
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 4e-30 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM5923_2521 YP_003417724.1 hypothetical protein NC_008702.1.4606598. Protein 5e-26 44
LM5923_2521 YP_003417724.1 hypothetical protein CP001581.1.gene798.p Protein 4e-28 43