Gene Information

Name : LM5923_2219 (LM5923_2219)
Accession : YP_003417422.1
Strain : Listeria monocytogenes 08-5923
Genome accession: NC_013768
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3049
EC number : -
Position : 2230367 - 2231344 bp
Length : 978 bp
Strand : -
Note : -

DNA sequence :
ATGTGTACGTCAATAACTTATACAACGAAGGATCACTATTTTGGAAGGAATTTCGATTATGAACTTTCTTACAAAGAAGT
TGTGGTTGTTACGCCGAAAAATTACCCGTTCCATTTTCGCAAGGTAGAGGATATAGAGAAGCATTATGCACTTATTGGTA
TTGCTGCTGTGATGGAAAACTACCCGTTGTATTATGATGCTACCAATGAAAAAGGCCTTAGTATGGCAGGACTCAATTTC
TCAGGAAATGCGGATTACAAGGATTTTGCAGAAGGTAAGGACAATGTGACCCCCTTTGAATTTATTCCGTGGATTCTTGG
TCAATGCGCTACTGTAAAAGAAGCAAGAAGCTTACTTCAGAGAATCAATCTCGTGAATATTAGTTTTAGTGAAAATTTAC
CGCTGTCTCCATTACATTGGTTGATGGCTGATCAAACAGAATCTATTGTAGTGGAATGTGTGAAAGATGGACTTCACATT
TATGATAATCCTGTTGGCGTGTTAACAAATAATCCAACATTTGATTACCAACTATTTAATTTAAACAATTATCGCGTTCT
TTCGAGTGAAACCCCAGAAAATAATTTTTCCAAAGAGATTGATTTGGATGCTTATAGTCGTGGGATGGGCGGAATTGGCT
TACCTGGTGATTTATCTTCTATGTCTCGTTTTGTGAAAGCAACTTTTACCAAATTGAATTCTGTTTCAGGTGATTCTGAA
TCAGAAAGTATTAGCCAATTTTTCCATATTTTAGGCTCGGTGGAACAACAAAAAGGTCTTTGTGATGTTGGTGGGGGAAA
ATACGAGCATACTATTTATTCCTCGTGTTGCAATATCGATAAAGGAATTTATTATTATAGAACATACGGAAACAGTCAAA
TTACTGGTGTGGATATGCACCAAGAGGATTTAGAGAGCAAAGAACTAGCTATTTATCCACTCGTCAATGAGCAACGACTA
AACATTGTTAACAAATAA

Protein sequence :
MCTSITYTTKDHYFGRNFDYELSYKEVVVVTPKNYPFHFRKVEDIEKHYALIGIAAVMENYPLYYDATNEKGLSMAGLNF
SGNADYKDFAEGKDNVTPFEFIPWILGQCATVKEARSLLQRINLVNISFSENLPLSPLHWLMADQTESIVVECVKDGLHI
YDNPVGVLTNNPTFDYQLFNLNNYRVLSSETPENNFSKEIDLDAYSRGMGGIGLPGDLSSMSRFVKATFTKLNSVSGDSE
SESISQFFHILGSVEQQKGLCDVGGGKYEHTIYSSCCNIDKGIYYYRTYGNSQITGVDMHQEDLESKELAIYPLVNEQRL
NIVNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 4e-114 75
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 3e-114 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM5923_2219 YP_003417422.1 hypothetical protein VFG2162 Protein 7e-146 99