Gene Information

Name : LM5923_2002 (LM5923_2002)
Accession : YP_003417205.1
Strain : Listeria monocytogenes 08-5923
Genome accession: NC_013768
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2010786 - 2011508 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAATTCAAGGTTTAACAATAGCGTATAAACAAAAGGTGGCAATTGATAATGTCACACTTCAAATAGCATCAGGAAA
ACTAACTGGTATTGTCGGTCCAAATGGGGCAGGTAAATCAACCTTATTAAAAGGAATGATGGGATTAATTCCGCGTGAAC
AAGGTCAAGTCACTTTAGCAGACAAACCACTTACTTATTGGAGAAAGAAAATCGCATATGTGCCGCAACGGAGTGAAGTA
GATTTAACTTTCCCAATTACCGTTTTTGATATGGTTTTGCTGGGCACATATCCAGCGCTCGGATTAATTAAGCGTCCTGG
AAAAAAAGAAAAGCAACTCGCGCTAGATGCGTTAGAGCAAGTGGAAATGACAGGCTTTATGAAAAGACAAATAGGAGAGC
TATCCGGTGGTCAATTGCAACGTGTTTTTATCGCACGCGCACTTGCCCAACATGCGGAAATTTTCTTTTTAGATGAGCCA
TTTGCAGGTATTGATATGACGAGTGAAGCGCTGATTATGCGACTGTTAAAAAAGCTAAGAGATAATGGGAAAACGATTGT
CGTGGTCCATCATGATTTTCATAAAGTGGCTGCTTACTTCGACGATATCATTTTACTCAATAAGAAATTAGTCGCGCACG
GTCCAGTGGAGCAAACATTTACAGAAGAAAAAATTCAATTTGCTTACGGTGACGCGCCGGTAGCATTTGCAGCGGGGGTG
TAA

Protein sequence : 
MEIQGLTIAYKQKVAIDNVTLQIASGKLTGIVGPNGAGKSTLLKGMMGLIPREQGQVTLADKPLTYWRKKIAYVPQRSEV
DLTFPITVFDMVLLGTYPALGLIKRPGKKEKQLALDALEQVEMTGFMKRQIGELSGGQLQRVFIARALAQHAEIFFLDEP
FAGIDMTSEALIMRLLKKLRDNGKTIVVVHHDFHKVAAYFDDIILLNKKLVAHGPVEQTFTEEKIQFAYGDAPVAFAAGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-54 51
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-54 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM5923_2002 YP_003417205.1 hypothetical protein BAC0400 Protein 7e-61 54
LM5923_2002 YP_003417205.1 hypothetical protein BAC0440 Protein 1e-45 41