Gene Information

Name : LM5923_2000 (LM5923_2000)
Accession : YP_003417203.1
Strain : Listeria monocytogenes 08-5923
Genome accession: NC_013768
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 2009011 - 2009943 bp
Length : 933 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAATAATAGTTGTATCCCTTTTCGCATTAGTAGTTGTGCTTGCGGGGTGTTCCAGTCAAAATAGCGATTCGAA
AAAAACAGACGGCAAATTAAATGTGGTAGCAACCTATTCGATATTAGCAGATATTGTAAAAAATGTAGGCGGGAACAAAA
TTGAACTTCATAGTATTGTACCTGTTGGCGTGGATCCGCATGAATATGATCCCTTACCAGCCAACATTCAAAGTGCTGCG
GATGCTGATTTAATTTTTTACAATGGATTGAATTTAGAAACAGGGAACGGTTGGTTTGATCGTATGTTAGAAACGGCGGA
TAAATCAAGAGAAGACAAGAATCAAGTGGTGGAGTTAAGTAAAGGTGTAAAACCCAAATACTTAACGGAAAAAGGCAAGA
CATCTGAAACAGATCCACATGCATGGCTTGATCTTCATAACGGAATTATCTATACCGAAAATGTGCGTGATGCACTTGTA
AAAGCGGATCCAGACAATGCGGATTTTTATAAAGAGAATGCGAAAAAATATATCGACAAATTAGCTACTCTGGATAAAGA
AGCAAAACAAAAATTTGCAGATTTGCCAGAAAATCAAAAAACATTAGTAACTAGCGAAGGCGCCTTTAAATATTTTGCAG
CTCGCTACGGATTAAAAGCAGCATATATTTGGGAGATAAATACAGAAAGCCAAGGTACTCCAGACCAAATGAAACAAATT
GTCGGTATCGTGGAAAAAGAAAAAGTGCCTAATCTATTTGTCGAAACAAGCGTAGATCCACGTAGTATGGAAAGTGTATC
TAAAGAAACAGGAGTACCAATTTTCGCGAAAATCTTCACGGACTCCACTGCAAAAAAAGGCGAAGTGGGCGACACGTATT
TAGAAATGATGCGGTACAATTTAGATAAAATCCATGATGGTTTAGCCAAATAA

Protein sequence : 
MKKIIVVSLFALVVVLAGCSSQNSDSKKTDGKLNVVATYSILADIVKNVGGNKIELHSIVPVGVDPHEYDPLPANIQSAA
DADLIFYNGLNLETGNGWFDRMLETADKSREDKNQVVELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALV
KADPDNADFYKENAKKYIDKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGLKAAYIWEINTESQGTPDQMKQI
VGIVEKEKVPNLFVETSVDPRSMESVSKETGVPIFAKIFTDSTAKKGEVGDTYLEMMRYNLDKIHDGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 2e-78 55
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 1e-78 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM5923_2000 YP_003417203.1 hypothetical protein VFG2157 Protein 5e-135 100
LM5923_2000 YP_003417203.1 hypothetical protein VFG2165 Protein 3e-83 61
LM5923_2000 YP_003417203.1 hypothetical protein VFG1359 Protein 9e-79 54