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Name : LM5923_1807 (LM5923_1807) Accession : YP_003417010.1 Strain : Listeria monocytogenes 08-5923 Genome accession: NC_013768 Putative virulence/resistance : Unknown Product : DNA recombinase, putative Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 1809907 - 1811550 bp Length : 1644 bp Strand : - Note : - DNA sequence : ATGCAAACAGCAAGAAAAAAGAATATATCGGTGATACCTTCACAGCCGGAATATGACCGAAGCATAAAGGTACAATTTAA GATGCTAAGGGTAGCAGCATACTGCCGAGTAAGTACCACCTTAGAACAGCAGGAAAGCAGCTATGAAGCACAGGTATCCT ATTACACCGAAAAGATACAGAGCAACCCAAATTGGAAGCTGGCAGGTATTTACGCTGATGATGGAAAATCGGCAACGAAC ACCAAAAAACGTGATGACTTCAATACCATGATAGATGATTGCATGGCAGGAAAAATAGATCTGGTCATCACCAAGTCAGT CAGCCGATTTGCAAGAAATACGGTAGACTCCCTACAAAATATCAGAAAACTCAAGGAAAAGAATATCGGCGTTATTTTTG AGAAAGAGGGTGTCAATACACTGGATGGTACAGGTGAGCTTCTGATTACTATCCTGAGCAGTCAGGCACAAGAAGAAAGC CGTAACCTGAGCGAAAACACTCGTTGGGGATTGGTAAGGCGATTTGAAAACGGAGTTATCTCGGTCAATCATACTAAGTT TTTAGGCTACACCAAGGACGAAAATGGCGAGCTGGTCATTGTACCAGAGGAAGCGGAACTGGTCAGACGAATTTTCAGGC TTTATTTAGAGGGTAATAGCAGCATCAAGATTGCAAAAATATTGAAAGCGGATGGTATCAAAACAGTAACCGGAATGGAT ACTTGGCAGCCTAGTGTCATAGATCAAATGCTACGAAATGAAAAATATATGGGCGATGCATTACTGCAAAAAACCTATAC CGTAGATTTTCTTAGCAAGAAACGAGTAAAAAATCAAGGAATTGTTCCTCAGTACTATATTGAGGATAACCATGAAGCAA TTATCCCAAGAGAGCTTTTTTATAGGGCACAAGAGGAAAAAGCAAGAAGAGCTGCTATTTACAAGCCATCTATTGAAAAG AAATCCAAGACAGAAAAAAGCAAATACAGTTCAAAATACTCTTTATCGGATATTATGATATGCGGCGAATGCGGTCAGCC TTACCGCAGGCAGACATGGTCAAAATACGGACAGAAAAGCGCCGTGTGGCGGTGTGACAACCGTTTAAAGAACGGAACAA AGAACTGCAAGCATTCCCCCACTTTAAAAGAACAGCCCCTGTATGAGGCAATTATGACCGCCATAAACAGCGTGGTTGAA AACCAAGGTGAATTTGTAGGAGCCTTCCGGGAAAATGTAATAAGAGTCATCGGAAGTTACTCCACCAGACACATACCTTC TGAATATGATGAGCAAATAGAAAAACTGCAGGGTGAAATGCTTACCCTTATTGAAGAAAATGCAAAGCAGGGTTCTGTAA ATGAAAATTTTGATGAGCAGTACCATAGCATCGCCGAGAAGATAAGGGAATTGAAATTGAAAAAACTTAAGCTGACACAG GAAAATAGGCTGGCAGAAACCTTTAGTCAGAGGATTGATGATGTGGATCATTGCCTCAAGGATATTACTAGTACGGTAGG AGGTTATGACGATGAATTGGTCAGGCGACTGCTGCAGAGTGTCAAAGTTATAAGCGAGGATAAGTTAGAAATACAATTCA AGTCTGGAATTGTGATGGAACAAAGGGTGGCATATAGTGAATAA Protein sequence : MQTARKKNISVIPSQPEYDRSIKVQFKMLRVAAYCRVSTTLEQQESSYEAQVSYYTEKIQSNPNWKLAGIYADDGKSATN TKKRDDFNTMIDDCMAGKIDLVITKSVSRFARNTVDSLQNIRKLKEKNIGVIFEKEGVNTLDGTGELLITILSSQAQEES RNLSENTRWGLVRRFENGVISVNHTKFLGYTKDENGELVIVPEEAELVRRIFRLYLEGNSSIKIAKILKADGIKTVTGMD TWQPSVIDQMLRNEKYMGDALLQKTYTVDFLSKKRVKNQGIVPQYYIEDNHEAIIPRELFYRAQEEKARRAAIYKPSIEK KSKTEKSKYSSKYSLSDIMICGECGQPYRRQTWSKYGQKSAVWRCDNRLKNGTKNCKHSPTLKEQPLYEAIMTAINSVVE NQGEFVGAFRENVIRVIGSYSTRHIPSEYDEQIEKLQGEMLTLIEENAKQGSVNENFDEQYHSIAEKIRELKLKKLKLTQ ENRLAETFSQRIDDVDHCLKDITSTVGGYDDELVRRLLQSVKVISEDKLEIQFKSGIVMEQRVAYSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 2e-110 | 50 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 2e-110 | 50 |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-112 | 48 |
