Gene Information

Name : LM5923_1308 (LM5923_1308)
Accession : YP_003416512.1
Strain : Listeria monocytogenes 08-5923
Genome accession: NC_013768
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1284623 - 1285774 bp
Length : 1152 bp
Strand : +
Note : -

DNA sequence :
ATGACTATCAAATTAAAAAACAACCTTGTAAATTACGAGGAAAAACGAACAGCTTTTGTCAATACTGTTAAAAACGAAGA
GACACAAGAAATTCAAAACAAGGCTTATGTGGAAATGGTAGATGCAATGGCTGCTGATATTATGGATCAAGCCAAAAAAG
AAGCGCGTCAAGAGGCGGACCAGTATATTTCAGCTAGCCGAACAGACAAAAATATCACGAATGAAGAAATTAAATTCTTC
AATGATATTAATAAAGAAGTTGGTTACAAAGAAGAAACATTGCTACCACAAACAGTCGTGGATGAAATTTTTGAAGATCT
AACAACTGAACATCCTTTCCTTGCATCTATTGGAATGCGTACAACCGGTTTACGTACTAAGTTCTTAAAATCCGAAACTA
GTGGTCTTGCTGTATGGGGCAAAATCTTTGGTGAAATCAAAGGACAATTGGATGCTACATTCAGTGAAGAAGAATCTATT
CAGAATAAATTAACCGCTTTTGTAGTAGTTCCTAAAGACCTTGAAAATTTTGGACCTGTATGGGTGAAACGTTTTGTAGT
TACTCAAATTGAAGAAGCGTTCGCAGTGGCGTTAGAAAGCGCGTTTATTATTGGTGATGGTAAAGATAAACCTGTTGGTC
TAACTCGCAAAGTTGGAAAAGGCACTAACGTAGTAGATGGTGTATATCCAGAAAAAGTTGCATCTGGAACACTGACATTT
GCTAGCTCTAAGGTAACTGTTAATGAATTAACAGATGTATATAAATATCATTCCGTAAAAGAAAATGGCAAGCCACTAAA
TGTAGCTGGTGAAGTTACGTTACTAGTCAATCCTACAGATGCTTGGGACGTTAAAAAACAGTACACAAGCTTAAATGCAA
ACGGTGTGTATGTGACTGCTTTGCCTTACAATTTAAATATCATTGAATCATTATTCGTTCCAGAAAAGAAAGCTATTTCT
TATGTTGCAAAACGTTATGATGCACTTGTTGGTGGAGCATTGAATATTTCTACTTTTGACCAAACGCTTGCATTTGAAGA
TCTTAACTTATATGCTGCAAAACAATTTGCGTATGGTAAAGCCAAAGACGAAAAAGCTGCCGCTGTGTGGACATTAAATA
TCAAACCAACAGATCAAACTCCGGAAGGGTGA

Protein sequence :
MTIKLKNNLVNYEEKRTAFVNTVKNEETQEIQNKAYVEMVDAMAADIMDQAKKEARQEADQYISASRTDKNITNEEIKFF
NDINKEVGYKEETLLPQTVVDEIFEDLTTEHPFLASIGMRTTGLRTKFLKSETSGLAVWGKIFGEIKGQLDATFSEEESI
QNKLTAFVVVPKDLENFGPVWVKRFVVTQIEEAFAVALESAFIIGDGKDKPVGLTRKVGKGTNVVDGVYPEKVASGTLTF
ASSKVTVNELTDVYKYHSVKENGKPLNVAGEVTLLVNPTDAWDVKKQYTSLNANGVYVTALPYNLNIIESLFVPEKKAIS
YVAKRYDALVGGALNISTFDQTLAFEDLNLYAAKQFAYGKAKDEKAAAVWTLNIKPTDQTPEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1104 YP_005736599.1 Phage major capsid protein Not tested ¥ÕSa2 Protein 1e-107 57
SA1774 NP_375072.1 hypothetical protein Not tested ¥ÕSa3 Protein 3e-108 56
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 3e-108 56
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 3e-108 56
SAKOR_01942 YP_008492130.1 Major capsid protein Not tested ¥ÕSa3 Protein 3e-108 56
SAV1963 NP_372487.1 hypothetical protein Not tested ¥ÕSa3 Protein 3e-108 56
SH1772 YP_253687.1 hypothetical protein Not tested ¥ÕSh1 Protein 3e-94 53