Gene Information

Name : LM5923_1304 (LM5923_1304)
Accession : YP_003416508.1
Strain : Listeria monocytogenes 08-5923
Genome accession: NC_013768
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4626
EC number : -
Position : 1280660 - 1282303 bp
Length : 1644 bp
Strand : +
Note : -

DNA sequence :
ATGATATCAAATAAACACGTTGATAACTATATACAGTCGTATGAAAGTGGAAAAATACTACTCAATAAAGAGCGAATCGA
TCTAATAAATTACTTACAAAAACATGTTCTTAGTAGAGATGATATATATTTTGATGAGACACAAATAGAAAATTATATTG
CTTTTAGTGAAAAATGGTACTTTCCTTTGGATAACTGGGAAAAGTTTATTGCACCATTTATTTTTTTATATTTTAAAGAA
GACAATGAACTGTTTTATGAAGAGTTCTTTATAACACTTGGTCGCGGTGGCGGTAAGAACGGGTTTATAAGTACATTATC
AAATTATTTTATAAGTCCGCTACATGGGATTAACAATTACGATGTTTCGGTAGTAGCGAATTCCGAAGACCAAGCGAAAG
TTAGTTTTAAAGAAGTATTTAATACAATAGACGGAAATCCTAAATTGGAAGGCAGCTTTGACGCGTGGAAAGCACAGATT
ATTGGCAAAGGAACCAACAGTGTTTTTAAATTTCAAACGTCAAATGCAAAAACTAAAGATGGTGGTCGTGAAGGCTGTGT
TATTTATGATGAAACACATGAATATGAAGATAGACAAATAATTGATGTATTCTCTGGAGGACTTGGCAAAGTCGCAAATC
CCAGAGAATTTTTTATTGGCACTAATGGATTTGTAAGAGCGGGATTTTATGACAAGTTGGAAGAACGTAGTAAAGCAATT
TTAAGTGGTGAAAATCTTAATGATCGCATGTTTCCTTTTATTTGTAAGCTAGATAATCCAGAGGAAGTCAAGAATGAAGA
TATGTGGGAAAAAGCAAATCCTGCTTTTGAAAAGCCATTAAGTCCTCGTTCTAAACGCTTACTAAATAAAGTTAGAAAAC
AATATGAAGCATTAACGAATAATCCAAGCGGCAGAGAAGCATTCATGACTAAACGAATGAACCTTCCAGAAGTAGACTTG
GAAAAGGTAGTAGCACCGTGGGAAGATATTCTCGCAACTAACCGAGAAATGCCAGAACTCCAAAACCGAGCTTGTATTGG
TGCGTTTGACTATGCAAGCGTTAAGGACTTTGCGGCTGTTGGATTGCTGTTTCGTGTAGGCGACGATTATATTTGGAAAA
CGCATTCCTTTGCTAGAAAAGGATATTTGGATATCGCAAACCTTAAACCACCCATTAAAGAATGGGAAAAACAGGGATTA
TTGACCATTGTAGATGAACCTACAATCGACCCTCGTCATGTGGTCAATTGGTTTGTTGAAATGCGAGAAACATATGGTAT
TCAAAAAGTAATTGGAGATAATTTCCGAATGGACCTGATGCGCCCGCTGTTTGAAGCAGAAGGATTCGAACTGGAGATTA
TTAGAAATCCACGTGCAGCTCATAGTTTGCTAGCTCCGCGAATTGAAACACTATTTGCTAATCATCGTATTGTGTTTGGA
GATAATCCGTTAATGCGATGGTATACAAATAATGTTGCAGTGAAAATCAAACCGGATGGGAATAAAGAGTATCTTAAAAA
AGACGAGCATAGACGTAAAACTGATGGATTTCAGGCTTTTGTCCATGCTCTTTGGCGTGCGGATGAAATAGAAGATATTG
ATGTAGAAGAGGTATTGAACATGCTTAACGCGATTGCGTTTTAA

Protein sequence :
MISNKHVDNYIQSYESGKILLNKERIDLINYLQKHVLSRDDIYFDETQIENYIAFSEKWYFPLDNWEKFIAPFIFLYFKE
DNELFYEEFFITLGRGGGKNGFISTLSNYFISPLHGINNYDVSVVANSEDQAKVSFKEVFNTIDGNPKLEGSFDAWKAQI
IGKGTNSVFKFQTSNAKTKDGGREGCVIYDETHEYEDRQIIDVFSGGLGKVANPREFFIGTNGFVRAGFYDKLEERSKAI
LSGENLNDRMFPFICKLDNPEEVKNEDMWEKANPAFEKPLSPRSKRLLNKVRKQYEALTNNPSGREAFMTKRMNLPEVDL
EKVVAPWEDILATNREMPELQNRACIGAFDYASVKDFAAVGLLFRVGDDYIWKTHSFARKGYLDIANLKPPIKEWEKQGL
LTIVDEPTIDPRHVVNWFVEMRETYGIQKVIGDNFRMDLMRPLFEAEGFELEIIRNPRAAHSLLAPRIETLFANHRIVFG
DNPLMRWYTNNVAVKIKPDGNKEYLKKDEHRRKTDGFQAFVHALWRADEIEDIDVEEVLNMLNAIAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1775 YP_253690.1 hypothetical protein Not tested ¥ÕSh1 Protein 6e-167 59
SAOV_1101 YP_005736596.1 Phage terminase large subunit Not tested ¥ÕSa2 Protein 4e-157 57
SAKOR_01945 YP_008492133.1 Terminase large subunit Not tested ¥ÕSa3 Protein 2e-157 57
SAV1966 NP_372490.1 phage terminase large subunit Not tested ¥ÕSa3 Protein 2e-157 57
SA1777 NP_375075.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-157 57
SAUSA300_1941 YP_494592.1 phi77 ORF003-like protein, phage terminase, large subunit Not tested ¥ÕSa3 Protein 2e-157 57
SAUSA300_1941 YP_494592.1 phi77 ORF003-like protein, phage terminase, large subunit Not tested ¥ÕSa3 Protein 2e-157 57