Gene Information

Name : LM5923_1115 (LM5923_1115)
Accession : YP_003416320.1
Strain : Listeria monocytogenes 08-5923
Genome accession: NC_013768
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : -
Position : 1112387 - 1113259 bp
Length : 873 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGTTAAAAAAGCAGTCATCCCGGCAGCAGGACTTGGTACAAGATTTCTTCCTGCAACAAAAGCGATGCCAAAAGA
AATACTTCCAATTGTAGACAAACCAACGATTCAATTTATCGTTGAAGAAGCAGTTGCGTCTGGAATTGAAGATATTTTAA
TTGTTACAGGGAAAGGAAAAAGAGCCATAGAAGACCATTTCGACTCTGTACCTGAACTTGAAAATAATTTACGTGAAAAA
AACAAATTAGATTTATTACATTTAGTGGAAGAAACCACTAATATTAACTTACATTTTATTCGTCAGTCGAAACCTAAGGG
ACTTGGAGACGCAATTTTACAAGCTAAAGGTTTCATTGGTAACGAACCATTTGTAGTAATGCTTGGGGATGACATCGTTC
AATCTAAAACCCCTTGTGCTAAACAATTAATCGATCAATACGAAAAGACTCATAGTTCTGTTATCGGTGTACAAAATGTT
CCTCGCGAAGAAACATATCGTTACGGCATTATTGATCCTGACAAAGAAGTAAGTGATCGTTTGTATAATGTAACTGGTTT
TGTGGAAAAGCCTAATGTAGAAGATGCTCCTTCCAACTTAGCGATTTTAGGAAGATATTTATTAACTCCAGAAATTTTTA
AGTATCTAGAAACACAAGAAGCTGGTTCTGGTGGAGAAATTCAATTAACTGATGCAATTAACCGTTTAAATGAAATTCAA
CCTGTTTTCGCCTATGATTTTGAAGGAGAACGTTTTGATGTTGGTGATAAATTCGGCTTTATTGAAACTACTTTAAAATT
TGCGCTAAAACATCCCGAAATTAAAGACGATGTCCGCGACCTAATTATCCGTCTCGGCGATGAACTTAAATAA

Protein sequence :
MKVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQFIVEEAVASGIEDILIVTGKGKRAIEDHFDSVPELENNLREK
NKLDLLHLVEETTNINLHFIRQSKPKGLGDAILQAKGFIGNEPFVVMLGDDIVQSKTPCAKQLIDQYEKTHSSVIGVQNV
PREETYRYGIIDPDKEVSDRLYNVTGFVEKPNVEDAPSNLAILGRYLLTPEIFKYLETQEAGSGGEIQLTDAINRLNEIQ
PVFAYDFEGERFDVGDKFGFIETTLKFALKHPEIKDDVRDLIIRLGDELK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 4e-85 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM5923_1115 YP_003416320.1 hypothetical protein VFG0964 Protein 6e-94 65