Gene Information

Name : LM5578_p78 (LM5578_p78)
Accession : YP_003415208.1
Strain :
Genome accession: NC_013767
Putative virulence/resistance : Unknown
Product : DNA invertase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 76187 - 76765 bp
Length : 579 bp
Strand : -
Note : -

DNA sequence :
ATGGATGTGACGAAATTGAAAATTGGGTATGCACGAGTTTCAACTGGCTTACAAAATTTAGATTTACAAATCGATAGTTT
AGAAAAAGATGGTTGTGAGAAAATTTTCCAGGATCATATCAGTGGCGCAAAAAGTAAACGCCCTGGATTGGACGCTGCGA
TTGATTTTTGTCGTTCTGGAGATACGATTGTGGTTTGGCGTTTAGATCGATTAGGTAGGAATATGGAAGATCTTATTCGT
GTTGTCAATCAACTAAATGATAATGGGATCAGTTTTCATAGTCTCCAAGAAAATATTACGATGAATAAATCCAGTTCCAC
CGGCCAGCTTATCTTTCATTTGTTCGCTGCTTTCGCAGAATTTGAACGGAATTTGATTTTAGAACGTTCTGCAGCAGGAA
GAGAAGCTGCTCGGGCAAGAGGTCGTTTTGGTGGCCGGCCGGAAAAACTAACAGCAGAAGATCTGGCTTTAATGCGAACC
CTCATTGATAATGGAACTCCCATTAAAACAATTGCTGCACGCTGGAATGTTTCGCGAACAACGATTTATCGATATCTCAA
CAAAAATCAGAGCGAATAA

Protein sequence :
MDVTKLKIGYARVSTGLQNLDLQIDSLEKDGCEKIFQDHISGAKSKRPGLDAAIDFCRSGDTIVVWRLDRLGRNMEDLIR
VVNQLNDNGISFHSLQENITMNKSSSTGQLIFHLFAAFAEFERNLILERSAAGREAARARGRFGGRPEKLTAEDLALMRT
LIDNGTPIKTIAARWNVSRTTIYRYLNKNQSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 4e-62 81
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 2e-62 81
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 2e-62 81
res AGK06929.1 resolvase Not tested SGI1 Protein 4e-34 55
res AGK06966.1 resolvase Not tested SGI1 Protein 4e-34 55
res AGK07012.1 resolvase Not tested SGI1 Protein 4e-34 55
res AAK02044.1 resolvase Not tested SGI1 Protein 4e-34 55
res AGK07070.1 resolvase Not tested SGI1 Protein 4e-34 55
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 4e-34 55
res AGF34985.1 resolvase Not tested SGI1 Protein 4e-34 55
res AGF35025.1 resolvase Not tested SGI1 Protein 4e-34 55
res AGF35059.1 resolvase Not tested SGI1 Protein 4e-34 55
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 9e-33 45
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 7e-24 42
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 1e-23 42
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 1e-23 42