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Name : clpL (LM5578_p12) Accession : YP_003415142.1 Strain : Genome accession: NC_013767 Putative virulence/resistance : Virulence Product : ATP-dependent endopeptidase clp ATP-binding subunit ClpL Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 12710 - 14824 bp Length : 2115 bp Strand : + Note : - DNA sequence : ATGGCAAATTTTTACGGAAATGATCCTTTTTTCAACAATGATATGGATGATGTTTTCAATCAATTATTTCGGCGCATGGA TAATCAAAATTCGGAGCGTGCACGGTATTTAGTTAATGGACAATCGTTGACACCGGATGAGTTTACTCAATACCGAGCAA CTGGTAAGCTACCCCAAAATAATAAAACAATAGAAGTATCTAAAGATGGTAAACAGGCTGTTAAAAAAGGAGGGATTTTA GAAAAGTTAGGGACTAATTTGACGGAACAGGCTCGTGATGGCTTACTAGATCCAGTGATTGGACGTGAGAATGAGATTCA AGAAACTGCAGAAATTTTGAGTCGTAGAACGAAAAATAATGCAATCTTAGTTGGTGATGCCGGTGTAGGTAAAACTGCAG TCGTCGAAGGTCTGGCACAAGCAATTGTGGCTGGTAAAGTTCCAGAAACGATTCAAGATAAAGAAATCTATTCGATTGAT TTATCGTCTTTGGAAGCGGGAACTCAATATCGCGGTTCTTTTGAAGAAAATATTAAACAGCTGGTAGAGGAAGTTAAAGC AGCTGGTAATATTATTCTATTCTTCGATGAAATTCATCAGATTCTCGGCACGGGTGCCACTGGTGGTGAAGATGGTGGCA AAGGATTGGCTGATATCATTAAACCTGCTTTGTCACGTGGCGAGCTGAGTGTAATCGGGGCTACGACTCAAGATGAATAT CGCAATACTATTTTGAAAAATGCGGCTTTGGCACGGCGATTCAATGATGTTGTGATTAATGAACCGACGGCCGCTGACAC TTTACGTATATTACAAGGTGTTAAAGAGCTGTACGAAAAACATCATCATGTTGTATTACCAGATGATGTTTTGAAGGCGG CTGTGGATTATTCAATCCAATATATACCACAACGCACTTTGCCAGATAAAGCTATCGATTTGATCGACATGACTGCGGCT CATTTAGCGGCTAAAAATTCGCAAACTGATGTTGAGACATTGGATCAACGCCTTAAAAAATTAGAGGCAGCTAAGGAGGC CGCCATTAAAGCGGAGGACTTTACAAAAGCCGCTGATATCAAGAAGTCGATCGAGGAAACCAAGCAAAAAATTAAAGAAA CGGATCAAAAAGAAAAAATCACTGCCACGATTGATGATGTGGCACAATCGGTTGAACGTTTAACTGGTATACCAGTTTCT GATATGGGCGCTAATGATATTGAGCGCTTGAAAAATCTTGATAAGCGTCTGAAAAGTAAGGTAATCGGTCAAGATGAAGC GGTTGAAATGGTAGCAAAAGCAATTCGGCGTAACCGTGCGGGCTTTTCAGAGGGTGATCAGCCGATTGGAAGTTTTCTGT TTGTGGGCCCAACTGGCGTAGGAAAGACTGAATTAGCTAAGCAATTAGCCTTAGATATGTTTGGAAATGAAAATGCGATT ATTCGGCTAGATATGAGTGAATATGCTGATCGTACAGCTGTGTCGAAATTAATTGGTACCTCGGCTGGATACGTAGGCTA TGAAGATAATGCTAATACTCTAACTGAACGGGTTCGGCGTAATCCATATTCCATTGTATTATTAGATGAAATTGAAAAGG CTGATCCACAAGTATTAACGTTACTGTTACAAGTGATGGATGATGGGCACTTAACGGATGGACAAGGCAATGTCATTAAT TTCAAAAATACGATTATTATTGCTACTTCTAATGCTGGCTTTGGTAATGAATCATTAAGTGGTGACGAGCAACGAGATCA GTCATTAATGGATAAGTTAGCACCATTTTTCCGCCCAGAATTTCTGAACCGTTTTAATGGAATCGTGGAATTTTCACATC TGACTAAGCAAGACTTAAGTCAAATTGTCGATTTAATGTTGTCGGATGTACAAAAAACTTTAGCCAAAAAATCCATCAAA CTTGAGGTAACTAAAGCGGCCAAAGATTGGCTGATGGAACAAGGCTATGATGAAGCAATGGGTGCGCGGCCGTTACGGCG AGTAATTGAACAACAAATTCGTGATAAGGTAACGGATTTTTACCTTGACCACTTAGATGTCAAAAACTTGAAGGCTGATT TAGTGGATGATGAGATTGTGATATCGGCAGCTTAG Protein sequence : MANFYGNDPFFNNDMDDVFNQLFRRMDNQNSERARYLVNGQSLTPDEFTQYRATGKLPQNNKTIEVSKDGKQAVKKGGIL EKLGTNLTEQARDGLLDPVIGRENEIQETAEILSRRTKNNAILVGDAGVGKTAVVEGLAQAIVAGKVPETIQDKEIYSID LSSLEAGTQYRGSFEENIKQLVEEVKAAGNIILFFDEIHQILGTGATGGEDGGKGLADIIKPALSRGELSVIGATTQDEY RNTILKNAALARRFNDVVINEPTAADTLRILQGVKELYEKHHHVVLPDDVLKAAVDYSIQYIPQRTLPDKAIDLIDMTAA HLAAKNSQTDVETLDQRLKKLEAAKEAAIKAEDFTKAADIKKSIEETKQKIKETDQKEKITATIDDVAQSVERLTGIPVS DMGANDIERLKNLDKRLKSKVIGQDEAVEMVAKAIRRNRAGFSEGDQPIGSFLFVGPTGVGKTELAKQLALDMFGNENAI IRLDMSEYADRTAVSKLIGTSAGYVGYEDNANTLTERVRRNPYSIVLLDEIEKADPQVLTLLLQVMDDGHLTDGQGNVIN FKNTIIIATSNAGFGNESLSGDEQRDQSLMDKLAPFFRPEFLNRFNGIVEFSHLTKQDLSQIVDLMLSDVQKTLAKKSIK LEVTKAAKDWLMEQGYDEAMGARPLRRVIEQQIRDKVTDFYLDHLDVKNLKADLVDDEIVISAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-128 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpL | YP_003415142.1 | ATP-dependent endopeptidase clp ATP-binding subunit ClpL | VFG0080 | Protein | 2e-142 | 48 |
| clpL | YP_003415142.1 | ATP-dependent endopeptidase clp ATP-binding subunit ClpL | VFG0079 | Protein | 3e-132 | 45 |
