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Name : copB (LM5578_p01) Accession : YP_003415131.1 Strain : Genome accession: NC_013767 Putative virulence/resistance : Resistance Product : copper-transporting P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 134 - 2017 bp Length : 1884 bp Strand : + Note : - DNA sequence : ATGATGGGAGTTAAATTACCGTTTCAAATTTCATTTACAGGGTCAGATTGGATTGTATTAATTCTTGCTACAATTTTATT CTTTTACGGAGGAAAGCCATTTTTATCAGGGGCTAAAGATGAAATTTCAACTAAAAAACCTGGAATGATGACGCTTGTTG CTCTAGGTATTTCAGTAGCTTATATTTATAGTTTATACGCCTTTTATATGAATAACTTCAGTGGTTCATCCACACATACA ATGGACTTTTTCTGGGAATTAGCGACTTTAATTTTAATCATGTTATTAGGTCATTGGATTGAAATGAACGCAGTAGGTAA TGCAGGCAATGCACTGAAGAAAATGGCAGAACTTTTACCTAATACTGCAGTGAAGCTGATTGATAACAATCAACGAGAAG AAGTTAAAATATCAGATATTCATATTGACGATATTGTGGAAGTCAGAGCAGGCGAAAGTATACCCACAGACGGAATCATT GTTCAAGGAGAAACATCAATTGACGAATCATTAGTTACTGGCGAATCAAAAAAAGTTCATAAAACTCATAATGATGATGT TATTGGAGGTTCAATTAATGGTTCAGGTACAGTACAAGTTAAAGTGACTGCTACGGGTGAAAATGGCTACCTATCTCAAG TTATGGGTCTTGTTAACCAAGCTCAAAACGATAAGTCAAAAGCTGAACTCCTCTCTGATAAAGTCGCAGGTTATTTGTTT TACTTTGCAGTAAGTATTGGCCTGATTTCATTTATTGTATGGATGCTTATTCAAAACAACGTCGATTTCGCACTTGAACG GCTAGTAACCGTATTAGTCATTGCTTGTCCACATGCATTAGGCTTGGCAATACCTTTAGTTACAGCACGTTCTACCTCTA TAGGCGCACATAATGGTTTAATCATTAAAAACAGAGAATCTGTAGAAATCGCACAACACATTGATTACATCATGATGGAT AAAACTGGGACACTAACTGAAGGTAACTTTTCAGTGAATCACTATGAAAGTTTTACAGACGAGTTAAATAATGAAGAAAT ATTGAGTCTATTTGCTTCATTAGAAAGTAATTCTAATCATCCACTTGCCACTGGTATTGTTGATTTTGCTAAAGGCAAAA ATATTTCATATGCTACTCCTCAAGAAGTTAATAATATTCCAGGTGTAGGCTTAGAAGGCACAGTTGATAATAAAAAACTC AAAATAGTGAATGTTTCTTATCTCGATAAAAGCAATTTTGATTATAATAAAGAACAATTTACGAATCTCGCTCAACAAGG GAATTCTATTAGTTATCTAATTCATGACCGACAAGTTATTGGTATTATCGCACAAGGCGATAAAATTAAAGAAAGTTCAA AACAAATGGTTTCGGATTTATTATCGAGAAACATTACGCCAGTCATGCTTACAGGCGATAATAAAGAAGTGGCACAAACA GTGGCTGAAGAATTAGGTATTAGTGATGTCCACGCGCAATTGATGCCCGAAGATAAAGAAAGTATTATCCAAGATTATCA AAGCAATGGTAGCAAAATCATGATGGTTGGTGATGGTATCAATGATGCGCCAAGCCTTATTAGAGCAGATATTGGTATGG CAATTGGCGCAGGGACAGATGTAGCTATTGAATCGGGGGATGTCATACTCGTTAAAAGTAATCCTTCTGATATTATCAAT TTTTTGTCCCTTTCAAAAAATACGATGAAAAAAATGGTTCAAAATTTATGGTGGGGCGCAGGATATAACGTGATTGCAGT TCCTCTTGCAGCTGGTATATTAGCTTCTATTGGTTTAATATTATCACCTGCTGTGGGTGCAATACTTATGTCTTTAAGTA CGATCATCGTAGCAATTAATGCATTTACATTAAAATTAAAATAA Protein sequence : MMGVKLPFQISFTGSDWIVLILATILFFYGGKPFLSGAKDEISTKKPGMMTLVALGISVAYIYSLYAFYMNNFSGSSTHT MDFFWELATLILIMLLGHWIEMNAVGNAGNALKKMAELLPNTAVKLIDNNQREEVKISDIHIDDIVEVRAGESIPTDGII VQGETSIDESLVTGESKKVHKTHNDDVIGGSINGSGTVQVKVTATGENGYLSQVMGLVNQAQNDKSKAELLSDKVAGYLF YFAVSIGLISFIVWMLIQNNVDFALERLVTVLVIACPHALGLAIPLVTARSTSIGAHNGLIIKNRESVEIAQHIDYIMMD KTGTLTEGNFSVNHYESFTDELNNEEILSLFASLESNSNHPLATGIVDFAKGKNISYATPQEVNNIPGVGLEGTVDNKKL KIVNVSYLDKSNFDYNKEQFTNLAQQGNSISYLIHDRQVIGIIAQGDKIKESSKQMVSDLLSRNITPVMLTGDNKEVAQT VAEELGISDVHAQLMPEDKESIIQDYQSNGSKIMMVGDGINDAPSLIRADIGMAIGAGTDVAIESGDVILVKSNPSDIIN FLSLSKNTMKKMVQNLWWGAGYNVIAVPLAAGILASIGLILSPAVGAILMSLSTIIVAINAFTLKLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 0.0 | 85 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| copB | YP_003415131.1 | copper-transporting P-type ATPase | BAC0079 | Protein | 0.0 | 58 |
| copB | YP_003415131.1 | copper-transporting P-type ATPase | BAC0383 | Protein | 1e-146 | 49 |
| copB | YP_003415131.1 | copper-transporting P-type ATPase | BAC0629 | Protein | 1e-126 | 46 |
