Gene Information

Name : nifJ (LM5578_0908)
Accession : YP_003413024.1
Strain : Listeria monocytogenes 08-5578
Genome accession: NC_013766
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0674
EC number : -
Position : 891736 - 895383 bp
Length : 3648 bp
Strand : +
Note : -

DNA sequence :
ATGCGAAATAGAAAAACAATGGATGGAAACACGGCCGCAGCTTATATTTCTTATGCTTTTACAGAAGTTGCAGCAATCTA
TCCGATTACCCCTTCCTCCACCATGGCTGAACTTGTGGACGAATGGTCATCAAAGAACAAGAAAAATTTATTTAATGAAC
CTGTAAAAGTAGTAGAAATGCAGTCCGAAGCAGGAGCAGCAGGAACAGTTCACGGATCACTTCAAGCTGGCGCGCTAACT
AGCACATACACAGCAAGCCAAGGTTTACTTTTAATGATTCCTAATATGTACAAAATTGCCGGCGAACTATTACCAACTGT
TTTCCATGTTTCCGCAAGAACGATTTCGGCGGCATCGCTGAATATTTTTGGTGATCATAGTGACGTGATGGCAGCGCGCC
AAACTGGATTTGCGATGCTAGCAGAAGGTTCCGTTCAAGAAGTAATGGACTTATCTGCAATTGCTCATCTGGCTTCACTA
AAAGGAAGTTTGCCATTTTTAAATTTCTTTGACGGCTTTCGGACGAGCCACGAATTGCAAAAAATCGAAGTACTTGAATA
TGACGAATTAGAAAATTTGCTCGACAAAGAGGCATTACAACAATTTAGAAATCGCGCAATGACGCCAAACAATCCTAAAA
CATTAGGTTCGAATCAAAATCCAGATATCTTTTTCCAACAAAGAGAAACGGTGAACCGTTATTACGAGGAAATTCCTAGT
ATCGTTCAAAATTATATGCAAGAAATTAATCAGCTTCGTGGCACAGATTATGACTTAGTAAATTATTATGGAGCAGAAGA
CGCAACAGATGTCATTGTGGCGATGGGCTCCGTAACACCAGTCATCGAGCAAGTCATTGATTACTTAACAACCCAAGGGA
AAAAAGTCGGTTTGCTAAATATTCGCTTATATCGTCCTTTCCCAGCAGAAAACTTTTTAACAAAACTGCCGAAAACAGTA
GAACGCGTGGCTGTTTTAGACCGGACGAAAGAACCCGGATCAGGCGGGGAACCACTTTTACTCGACGTGCAAAGTGTGCT
TTATGATAGTGAGACTCGTCCACTAGTTATTGGCGGTAGATATGGCTTAGGTTCAAAAGATGTTACACCAGACCAGATTC
TCGGTGTTTATTCGCACCTAATGACCGAAAAACCAAAACCGCGCTTTACGATTGGGATTACAGATGATATTACGAACCTA
TCTATCGAAAATGATGGACCGAGTGACCTCACTTCTGAAAAAACTTTCCAATGCAAATTCTGGGGTTTTGGCTCGGATGG
TACTGTTGGCGCAAATAAAGCCGCAATCAAAATTATTGGCGATAATACCGATTTATACGCACAGGGTTACTTTTCCTATG
ATTCGAAAAAATCGGGCGGGCTAACTGTTTCGCATTTGCGCTTTGGTGAAAAACGAATTCGCTCAGCCTATCTAATCCAA
CAAGCGGATTTTGTCTCATGCTCCACCTCGGCCTATTTACGTTCCTATGATTTATTAAAAGGTTTAAAACCAGGCGGAAC
ATTCTTGCTCAATACCATTTGGGAAGGCGAACAGTTAGAACGCCATTTGCCAGCTGCCATGCGCGAATATATTGCGAAAA
ATAATATTCAATTTTATACATTAAATGCGATGAGAATTGCAGGAGAAGCGGGACTTGGTAGAAGAATTAATACCGTTATG
CAAACGGCCTTTTTCCGAGTGACCGACATTTTACCGTTCGAAAAAGCACTTGCTGATTTAAAAGCATCGGCTATCGCTAC
TTACGGGAAAAAAGATATGGCAGTTGCGGAGAAAAATATTCTCGCGATGGACCAAACAGTTGCTAATTTGCATAAAGTAG
AAGTTCCTGCAAGCTGGGCAAATCCAGTTGTAACAGCAGAAACGAATGCAACGACTGAAAAACCAGCTTATGTACAAAAT
ATCCTTGAGCCAGTGAATCGCTTAGAAGGCGACAACTTGACTGTTGGTGATTTAATTTCGAATGGTATGGTCAGTGGGGC
TTATCCTCCGGGGACTGCAGCTTACGAAAAACGCGGAATTGCACTCGAAGTTCCTGAATGGATTTCTGAAAACTGTACGA
TGTGCAATGAATGCGCCTTTGTTTGTCCGCATGCTGCCATTCGTCCGATTTTAACAGATGAAGAAGAAATGGAATCTGCT
CCAGAAGGCTTTATGACAAGAGAAATGCGCGGCAAAGATGGCCTTCGTTACCGTATCCAAGTTTCCCCAATGGACTGCAC
TGGTTGTAACTTATGTGCGGAAACGTGTCCGGCGAAAGATAAAGCGCTTGTAATGAAACCATTTGAAGAAGTGGCAGCTA
AAGAAAATCCGAATTGGTCATTTGCGATTAATGTGAAACCGAAGAAAAACCCTGGGAAGAAAAATACTGTACCAGGAAGC
CAATTTGAACAACCGTTATTGGAGTTCTCTGGTGCTTGTGCAGGTTGCGGTGAAACTCCTTATGTTAAATTATTAACGCA
AATGTTTGGCGACCGGATGATGATTGCTAATGCAACTGGTTGTTCCTCTATTTGGGGCGCATCTGCACCTGCAACGCCTT
ATACTGTCAATGATAAAGGACATGGACCGGCGTGGGGCAATTCCCTTTTAGAAGATAACGCAGAATATGGTTATGGTATG
TATTTAGCAAACCAAACCATGCGAAAAGCTTTAAATAATAAAGTGACAAAAGCACTCAGAGAAGAAGCCATGTCAGAAAC
GTTACGCGAGGCGCTTGTTGATTGGCAACTGCAAATGGACGTTTCAGAAGATACGCGCGAACGTGCAGAAGCATTACAAC
TTGCACTTCTTAGTGAGATGGAAGATAGCGCGGCACTCGAATCTATTTATAATGACCGAGAATTATTTATTAAACGATCG
CAGTGGATGCTTGGAGGCGACGGCTGGGCATATGATATTGGCTTCGGCGGAATTGATCATGTGTTAGCATCAGGCGAAGA
TGTAAATATTTTCGTAATGGATAATGAAGTATATTCAAATACTGGTGGACAATCATCGAAAGCCACACCAACAGCAGCTA
TCGCCAAATTTGCTTCAGGTGGGAAATCGGTCGGCAAAAAAGATCTTGGCATTATGGCGATGAGCTATGGAAATATTTAT
GTAGCCCAAATTGCGATGGGAGCGAATAAGCGCCAAACCTTAAAAGCAATTGAAGAAGCGGAAGCATATCCAGGGCCATC
TTTAATTATTGCTTATACGCCATGTATTAATCACGGAATTTCAAGCGGTATGAAAACGATGCTTAGTGAAACGCAAAAAG
CAGTGGAATGCGGCTATTGGAGTTTGTATCGTTACAATCCAGCACTGGAAGAAAAAGGAAAAAATCCAATGACGATGGAC
TACAAAAAAGTCGATTTCGATCAATTCGAAGACTTCCTAAAACGCGAAACAAGATACTCGGCGCTCTATAAAGCAAATCC
AGAAGTTGCCACAAAACTATCTGAGAAAACCCGCTTGGATGCAGAAAAACGCTTTAAACGCTACGCAACAATGGCCGGGC
TTGATTTAGAGAAAATATGGAAGAAAAAAGAAGCAATTGAAGATGTGAAAGCGCCCGTTGATGATGAGCGAGCAGCAAGG
AAAGCAGCACGTGAAGCAAGAAGATTAGCGCGGGAGCAAGGTAAATAA

Protein sequence :
MRNRKTMDGNTAAAYISYAFTEVAAIYPITPSSTMAELVDEWSSKNKKNLFNEPVKVVEMQSEAGAAGTVHGSLQAGALT
STYTASQGLLLMIPNMYKIAGELLPTVFHVSARTISAASLNIFGDHSDVMAARQTGFAMLAEGSVQEVMDLSAIAHLASL
KGSLPFLNFFDGFRTSHELQKIEVLEYDELENLLDKEALQQFRNRAMTPNNPKTLGSNQNPDIFFQQRETVNRYYEEIPS
IVQNYMQEINQLRGTDYDLVNYYGAEDATDVIVAMGSVTPVIEQVIDYLTTQGKKVGLLNIRLYRPFPAENFLTKLPKTV
ERVAVLDRTKEPGSGGEPLLLDVQSVLYDSETRPLVIGGRYGLGSKDVTPDQILGVYSHLMTEKPKPRFTIGITDDITNL
SIENDGPSDLTSEKTFQCKFWGFGSDGTVGANKAAIKIIGDNTDLYAQGYFSYDSKKSGGLTVSHLRFGEKRIRSAYLIQ
QADFVSCSTSAYLRSYDLLKGLKPGGTFLLNTIWEGEQLERHLPAAMREYIAKNNIQFYTLNAMRIAGEAGLGRRINTVM
QTAFFRVTDILPFEKALADLKASAIATYGKKDMAVAEKNILAMDQTVANLHKVEVPASWANPVVTAETNATTEKPAYVQN
ILEPVNRLEGDNLTVGDLISNGMVSGAYPPGTAAYEKRGIALEVPEWISENCTMCNECAFVCPHAAIRPILTDEEEMESA
PEGFMTREMRGKDGLRYRIQVSPMDCTGCNLCAETCPAKDKALVMKPFEEVAAKENPNWSFAINVKPKKNPGKKNTVPGS
QFEQPLLEFSGACAGCGETPYVKLLTQMFGDRMMIANATGCSSIWGASAPATPYTVNDKGHGPAWGNSLLEDNAEYGYGM
YLANQTMRKALNNKVTKALREEAMSETLREALVDWQLQMDVSEDTRERAEALQLALLSEMEDSAALESIYNDRELFIKRS
QWMLGGDGWAYDIGFGGIDHVLASGEDVNIFVMDNEVYSNTGGQSSKATPTAAIAKFASGGKSVGKKDLGIMAMSYGNIY
VAQIAMGANKRQTLKAIEEAEAYPGPSLIIAYTPCINHGISSGMKTMLSETQKAVECGYWSLYRYNPALEEKGKNPMTMD
YKKVDFDQFEDFLKRETRYSALYKANPEVATKLSEKTRLDAEKRFKRYATMAGLDLEKIWKKKEAIEDVKAPVDDERAAR
KAAREARRLAREQGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AFJ97267.1 pyruvate ferredoxin Virulence Not named Protein 0.0 52